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Authors: André Leier
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Journal Article
PASSION: an ensemble neural network approach for identifying the binding sites of RBPs on circRNAs
Cangzhi Jia and others
Bioinformatics, Volume 36, Issue 15, August 2020, Pages 4276–4282, https://doi.org/10.1093/bioinformatics/btaa522
Published: 19 May 2020
Journal Article
DeepCleave: a deep learning predictor for caspase and matrix metalloprotease substrates and cleavage sites
Fuyi Li and others
Bioinformatics, Volume 36, Issue 4, February 2020, Pages 1057–1065, https://doi.org/10.1093/bioinformatics/btz721
Published: 30 September 2019
Journal Article
PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins
Yanju Zhang and others
Bioinformatics, Volume 36, Issue 3, February 2020, Pages 704–712, https://doi.org/10.1093/bioinformatics/btz629
Published: 08 August 2019
Journal Article
MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters
Meng Zhang and others
Bioinformatics, Volume 35, Issue 17, September 2019, Pages 2957–2965, https://doi.org/10.1093/bioinformatics/btz016
Published: 11 January 2019
Journal Article
Bastion3: a two-layer ensemble predictor of type III secreted effectors
Jiawei Wang and others
Bioinformatics, Volume 35, Issue 12, June 2019, Pages 2017–2028, https://doi.org/10.1093/bioinformatics/bty914
Published: 02 November 2018
Journal Article
Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome
Fuyi Li and others
Bioinformatics, Volume 34, Issue 24, December 2018, Pages 4223–4231, https://doi.org/10.1093/bioinformatics/bty522
Published: 27 June 2018
Journal Article
Bastion6: a bioinformatics approach for accurate prediction of type VI secreted effectors
Jiawei Wang and others
Bioinformatics, Volume 34, Issue 15, August 2018, Pages 2546–2555, https://doi.org/10.1093/bioinformatics/bty155
Published: 14 March 2018
Journal Article
iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences
Zhen Chen and others
Bioinformatics, Volume 34, Issue 14, July 2018, Pages 2499–2502, https://doi.org/10.1093/bioinformatics/bty140
Published: 08 March 2018
Journal Article
PROSPERous: high-throughput prediction of substrate cleavage sites for 90 proteases with improved accuracy
Jiangning Song and others
Bioinformatics, Volume 34, Issue 4, February 2018, Pages 684–687, https://doi.org/10.1093/bioinformatics/btx670
Published: 23 October 2017
Journal Article
POSSUM: a bioinformatics toolkit for generating numerical sequence feature descriptors based on PSSM profiles
Jiawei Wang and others
Bioinformatics, Volume 33, Issue 17, September 2017, Pages 2756–2758, https://doi.org/10.1093/bioinformatics/btx302
Published: 10 May 2017
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