1-20 of 28
Authors: Arne Elofsson
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Journal Article
M-Ionic: prediction of metal-ion-binding sites from sequence using residue embeddings
Aditi Shenoy and others
Bioinformatics, Volume 40, Issue 1, January 2024, btad782, https://doi.org/10.1093/bioinformatics/btad782
Published: 04 January 2024
Journal Article
Evaluation of AlphaFold-Multimer prediction on multi-chain protein complexes
Wensi Zhu and others
Bioinformatics, Volume 39, Issue 7, July 2023, btad424, https://doi.org/10.1093/bioinformatics/btad424
Published: 05 July 2023
Journal Article
AFTGAN: prediction of multi-type PPI based on attention free transformer and graph attention network
Yanlei Kang and others
Bioinformatics, Volume 39, Issue 2, February 2023, btad052, https://doi.org/10.1093/bioinformatics/btad052
Published: 24 January 2023
Journal Article
Limits and potential of combined folding and docking
Gabriele Pozzati and others
Bioinformatics, Volume 38, Issue 4, February 2022, Pages 954–961, https://doi.org/10.1093/bioinformatics/btab760
Published: 12 November 2021
Journal Article
GraphQA: protein model quality assessment using graph convolutional networks
Federico Baldassarre and others
Bioinformatics, Volume 37, Issue 3, February 2021, Pages 360–366, https://doi.org/10.1093/bioinformatics/btaa714
Published: 11 August 2020
Journal Article
PconsC4: fast, accurate and hassle-free contact predictions
Mirco Michel and others
Bioinformatics, Volume 35, Issue 15, August 2019, Pages 2677–2679, https://doi.org/10.1093/bioinformatics/bty1036
Published: 24 December 2018
Journal Article
Large-scale structure prediction by improved contact predictions and model quality assessment
Mirco Michel and others
Bioinformatics, Volume 33, Issue 14, July 2017, Pages i23–i29, https://doi.org/10.1093/bioinformatics/btx239
Published: 12 July 2017
Journal Article
Predicting accurate contacts in thousands of Pfam domain families using PconsC3
Mirco Michel and others
Bioinformatics, Volume 33, Issue 18, September 2017, Pages 2859–2866, https://doi.org/10.1093/bioinformatics/btx332
Published: 23 May 2017
Journal Article
GWAR: robust analysis and meta-analysis of genome-wide association studies
Niki L Dimou and others
Bioinformatics, Volume 33, Issue 10, May 2017, Pages 1521–1527, https://doi.org/10.1093/bioinformatics/btx008
Published: 20 January 2017
Journal Article
ProQ3D: improved model quality assessments using deep learning
Karolis Uziela and others
Bioinformatics, Volume 33, Issue 10, May 2017, Pages 1578–1580, https://doi.org/10.1093/bioinformatics/btw819
Published: 04 January 2017
Journal Article
PRED-TMBB2: improved topology prediction and detection of beta-barrel outer membrane proteins
Konstantinos D Tsirigos and others
Bioinformatics, Volume 32, Issue 17, September 2016, Pages i665–i671, https://doi.org/10.1093/bioinformatics/btw444
Published: 29 August 2016
Journal Article
Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins
Sikander Hayat and others
Bioinformatics, Volume 32, Issue 10, May 2016, Pages 1571–1573, https://doi.org/10.1093/bioinformatics/btw025
Published: 21 January 2016
Journal Article
Improved topology prediction using the terminal hydrophobic helices rule
Christoph Peters and others
Bioinformatics, Volume 32, Issue 8, April 2016, Pages 1158–1162, https://doi.org/10.1093/bioinformatics/btv709
Published: 07 December 2015
Journal Article
PconsFold: improved contact predictions improve protein models
Mirco Michel and others
Bioinformatics, Volume 30, Issue 17, September 2014, Pages i482–i488, https://doi.org/10.1093/bioinformatics/btu458
Published: 22 August 2014
Journal Article
PconsC: combination of direct information methods and alignments improves contact prediction
Marcin J. Skwark and others
Bioinformatics, Volume 29, Issue 14, July 2013, Pages 1815–1816, https://doi.org/10.1093/bioinformatics/btt259
Published: 06 June 2013
Journal Article
PconsD: ultra rapid, accurate model quality assessment for protein structure prediction
Marcin J. Skwark and Arne Elofsson
Bioinformatics, Volume 29, Issue 14, July 2013, Pages 1817–1818, https://doi.org/10.1093/bioinformatics/btt272
Published: 14 May 2013
Journal Article
Ranking models of transmembrane β-barrel proteins using Z-coordinate predictions
Sikander Hayat and Arne Elofsson
Bioinformatics, Volume 28, Issue 12, June 2012, Pages i90–i96, https://doi.org/10.1093/bioinformatics/bts233
Published: 09 June 2012
Journal Article
BOCTOPUS: improved topology prediction of transmembrane β barrel proteins
Sikander Hayat and Arne Elofsson
Bioinformatics, Volume 28, Issue 4, February 2012, Pages 516–522, https://doi.org/10.1093/bioinformatics/btr710
Published: 13 January 2012
Journal Article
KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2
Nanjiang Shu and Arne Elofsson
Bioinformatics, Volume 27, Issue 12, June 2011, Pages 1702–1703, https://doi.org/10.1093/bioinformatics/btr235
Published: 19 April 2011
Journal Article
Rapid membrane protein topology prediction
Aron Hennerdal and Arne Elofsson
Bioinformatics, Volume 27, Issue 9, May 2011, Pages 1322–1323, https://doi.org/10.1093/bioinformatics/btr119
Published: 13 April 2011
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