1-13 of 13
Authors: Dick de Ridder
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Journal Article
PanTools v3: functional annotation, classification and phylogenomics
Eef M Jonkheer and others
Bioinformatics, Volume 38, Issue 18, September 2022, Pages 4403–4405, https://doi.org/10.1093/bioinformatics/btac506
Published: 21 July 2022
Journal Article
Geometricus represents protein structures as shape-mers derived from moment invariants
Janani Durairaj and others
Bioinformatics, Volume 36, Issue Supplement_2, December 2020, Pages i718–i725, https://doi.org/10.1093/bioinformatics/btaa839
Published: 29 December 2020
Journal Article
GeneNoteBook, a collaborative notebook for comparative genomics
Rens Holmer and others
Bioinformatics, Volume 35, Issue 22, November 2019, Pages 4779–4781, https://doi.org/10.1093/bioinformatics/btz491
Published: 14 June 2019
Journal Article
poreTally: run and publish de novo nanopore assembler benchmarks
Carlos de Lannoy and others
Bioinformatics, Volume 35, Issue 15, August 2019, Pages 2663–2664, https://doi.org/10.1093/bioinformatics/bty1045
Published: 24 December 2018
Journal Article
Improved inference of intermolecular contacts through protein–protein interaction prediction using coevolutionary analysis
Miguel Correa Marrero and others
Bioinformatics, Volume 35, Issue 12, June 2019, Pages 2036–2042, https://doi.org/10.1093/bioinformatics/bty924
Published: 06 November 2018
Journal Article
TriPoly: haplotype estimation for polyploids using sequencing data of related individuals
Ehsan Motazedi and others
Bioinformatics, Volume 34, Issue 22, November 2018, Pages 3864–3872, https://doi.org/10.1093/bioinformatics/bty442
Published: 01 June 2018
Journal Article
PanTools: representation, storage and exploration of pan-genomic data
Siavash Sheikhizadeh and others
Bioinformatics, Volume 32, Issue 17, September 2016, Pages i487–i493, https://doi.org/10.1093/bioinformatics/btw455
Published: 29 August 2016
Journal Article
ACE: accurate correction of errors using K-mer tries
Siavash Sheikhizadeh and Dick de Ridder
Bioinformatics, Volume 31, Issue 19, October 2015, Pages 3216–3218, https://doi.org/10.1093/bioinformatics/btv332
Published: 28 May 2015
Journal Article
Exploring variation-aware contig graphs for (comparative) metagenomics using MaryGold
Jurgen F. Nijkamp and others
Bioinformatics, Volume 29, Issue 22, November 2013, Pages 2826–2834, https://doi.org/10.1093/bioinformatics/btt502
Published: 20 September 2013
Journal Article
De novo detection of copy number variation by co-assembly
Jurgen F. Nijkamp and others
Bioinformatics, Volume 28, Issue 24, December 2012, Pages 3195–3202, https://doi.org/10.1093/bioinformatics/bts601
Published: 09 October 2012
Journal Article
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies
Alexey A. Gritsenko and others
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1429–1437, https://doi.org/10.1093/bioinformatics/bts175
Published: 06 April 2012
Journal Article
Integrating genome assemblies with MAIA
Jurgen Nijkamp and others
Bioinformatics, Volume 26, Issue 18, September 2010, Pages i433–i439, https://doi.org/10.1093/bioinformatics/btq366
Published: 04 September 2010
Journal Article
Maximum significance clustering of oligonucleotide microarrays
Dick de Ridder and others
Bioinformatics, Volume 22, Issue 3, February 2006, Pages 326–331, https://doi.org/10.1093/bioinformatics/bti788
Published: 22 November 2005
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