1-20 of 30
Authors: Jiangning Song
Journal Article
CTEC: a cross-tabulation ensemble clustering approach for single-cell RNA sequencing data analysis
Bioinformatics, Volume 40, Issue 4, April 2024, btae130, https://doi.org/10.1093/bioinformatics/btae130
Published: 29 March 2024
Journal Article
Interpretable prediction models for widespread m6A RNA modification across cell lines and tissues
Bioinformatics, Volume 39, Issue 12, December 2023, btad709, https://doi.org/10.1093/bioinformatics/btad709
Published: 23 November 2023
Journal Article
MULGA, a unified multi-view graph autoencoder-based approach for identifying drug–protein interaction and drug repositioning
Bioinformatics, Volume 39, Issue 9, September 2023, btad524, https://doi.org/10.1093/bioinformatics/btad524
Published: 23 August 2023
Journal Article
Targeting tumor heterogeneity: multiplex-detection-based multiple instance learning for whole slide image classification
Bioinformatics, Volume 39, Issue 3, March 2023, btad114, https://doi.org/10.1093/bioinformatics/btad114
Published: 02 March 2023
Journal Article
PFresGO: an attention mechanism-based deep-learning approach for protein annotation by integrating gene ontology inter-relationships
Bioinformatics, Volume 39, Issue 3, March 2023, btad094, https://doi.org/10.1093/bioinformatics/btad094
Published: 16 February 2023
Journal Article
PScL-2LSAESM: bioimage-based prediction of protein subcellular localization by integrating heterogeneous features with the two-level SAE-SM and mean ensemble method
Bioinformatics, Volume 39, Issue 1, January 2023, btac727, https://doi.org/10.1093/bioinformatics/btac727
Published: 22 November 2022
Journal Article
MSNet-4mC: learning effective multi-scale representations for identifying DNA N4-methylcytosine sites
Bioinformatics, Volume 38, Issue 23, 1 December 2022, Pages 5160–5167, https://doi.org/10.1093/bioinformatics/btac671
Published: 07 October 2022
Journal Article
DEMoS: a deep learning-based ensemble approach for predicting the molecular subtypes of gastric adenocarcinomas from histopathological images
Bioinformatics, Volume 38, Issue 17, September 2022, Pages 4206–4213, https://doi.org/10.1093/bioinformatics/btac456
Published: 08 July 2022
Journal Article
DeepGenGrep: a general deep learning-based predictor for multiple genomic signals and regions
Bioinformatics, Volume 38, Issue 17, September 2022, Pages 4053–4061, https://doi.org/10.1093/bioinformatics/btac454
Published: 07 July 2022
Journal Article
PScL-DDCFPred: an ensemble deep learning-based approach for characterizing multiclass subcellular localization of human proteins from bioimage data
Bioinformatics, Volume 38, Issue 16, August 2022, Pages 4019–4026, https://doi.org/10.1093/bioinformatics/btac432
Published: 30 June 2022
Journal Article
XRRpred: accurate predictor of crystal structure quality from protein sequence
Bioinformatics, Volume 37, Issue 23, December 2021, Pages 4366–4374, https://doi.org/10.1093/bioinformatics/btab509
Published: 11 July 2021
Journal Article
OCTID: a one-class learning-based Python package for tumor image detection
Bioinformatics, Volume 37, Issue 21, November 2021, Pages 3986–3988, https://doi.org/10.1093/bioinformatics/btab416
Published: 01 June 2021
Journal Article
HEAL: an automated deep learning framework for cancer histopathology image analysis
Bioinformatics, Volume 37, Issue 22, November 2021, Pages 4291–4295, https://doi.org/10.1093/bioinformatics/btab380
Published: 19 May 2021
Journal Article
PASSION: an ensemble neural network approach for identifying the binding sites of RBPs on circRNAs
Bioinformatics, Volume 36, Issue 15, August 2020, Pages 4276–4282, https://doi.org/10.1093/bioinformatics/btaa522
Published: 19 May 2020
Journal Article
DeepCleave: a deep learning predictor for caspase and matrix metalloprotease substrates and cleavage sites
Bioinformatics, Volume 36, Issue 4, February 2020, Pages 1057–1065, https://doi.org/10.1093/bioinformatics/btz721
Published: 30 September 2019
Journal Article
PeNGaRoo, a combined gradient boosting and ensemble learning framework for predicting non-classical secreted proteins
Bioinformatics, Volume 36, Issue 3, February 2020, Pages 704–712, https://doi.org/10.1093/bioinformatics/btz629
Published: 08 August 2019
Journal Article
MULTiPly: a novel multi-layer predictor for discovering general and specific types of promoters
Bioinformatics, Volume 35, Issue 17, September 2019, Pages 2957–2965, https://doi.org/10.1093/bioinformatics/btz016
Published: 11 January 2019
Journal Article
Bastion3: a two-layer ensemble predictor of type III secreted effectors
Bioinformatics, Volume 35, Issue 12, June 2019, Pages 2017–2028, https://doi.org/10.1093/bioinformatics/bty914
Published: 02 November 2018
Journal Article
Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites in the human proteome
Bioinformatics, Volume 34, Issue 24, December 2018, Pages 4223–4231, https://doi.org/10.1093/bioinformatics/bty522
Published: 27 June 2018
Journal Article
ACPred-FL: a sequence-based predictor using effective feature representation to improve the prediction of anti-cancer peptides
Bioinformatics, Volume 34, Issue 23, December 2018, Pages 4007–4016, https://doi.org/10.1093/bioinformatics/bty451
Published: 01 June 2018
