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Authors: Mikael Boden
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Journal Article

Cytocipher determines significantly different populations of cells in single-cell RNA-seq data

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Brad Balderson and others
Bioinformatics, Volume 39, Issue 7, July 2023, btad435, https://doi.org/10.1093/bioinformatics/btad435
Published: 14 July 2023
Journal Article

T-Gene: improved target gene prediction

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Timothy O’Connor and others
Bioinformatics, Volume 36, Issue 12, June 2020, Pages 3902–3904, https://doi.org/10.1093/bioinformatics/btaa227
Published: 04 April 2020
Journal Article

SCRAM: a pipeline for fast index-free small RNA read alignment and visualization

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Stephen J Fletcher and others
Bioinformatics, Volume 34, Issue 15, August 2018, Pages 2670–2672, https://doi.org/10.1093/bioinformatics/bty161
Published: 15 March 2018
Journal Article

PhosphoPICK-SNP: quantifying the effect of amino acid variants on protein phosphorylation

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Ralph Patrick and others
Bioinformatics, Volume 33, Issue 12, June 2017, Pages 1773–1781, https://doi.org/10.1093/bioinformatics/btx072
Published: 10 February 2017
Journal Article

PhosphoPICK: modelling cellular context to map kinase-substrate phosphorylation events

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Ralph Patrick and others
Bioinformatics, Volume 31, Issue 3, February 2015, Pages 382–389, https://doi.org/10.1093/bioinformatics/btu663
Published: 09 October 2014
Journal Article

DLocalMotif: a discriminative approach for discovering local motifs in protein sequences

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Ahmed M. Mehdi and others
Bioinformatics, Volume 29, Issue 1, January 2013, Pages 39–46, https://doi.org/10.1093/bioinformatics/bts654
Published: 09 November 2012
Journal Article

Sorting the nuclear proteome

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Denis C. Bauer and others
Bioinformatics, Volume 27, Issue 13, July 2011, Pages i7–i14, https://doi.org/10.1093/bioinformatics/btr217
Published: 14 June 2011
Journal Article

A probabilistic model of nuclear import of proteins

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Ahmed M. Mehdi and others
Bioinformatics, Volume 27, Issue 9, May 2011, Pages 1239–1246, https://doi.org/10.1093/bioinformatics/btr121
Published: 03 March 2011
Journal Article

Assigning roles to DNA regulatory motifs using comparative genomics

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Fabian A. Buske and others
Bioinformatics, Volume 26, Issue 7, April 2010, Pages 860–866, https://doi.org/10.1093/bioinformatics/btq049
Published: 10 February 2010
Journal Article

Identifying sequence regions undergoing conformational change via predicted continuum secondary structure

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Mikael Bodén and Timothy L. Bailey
Bioinformatics, Volume 22, Issue 15, August 2006, Pages 1809–1814, https://doi.org/10.1093/bioinformatics/btl198
Published: 23 May 2006
Journal Article

Prediction of subcellular localization using sequence-biased recurrent networks

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Mikael Bodén and John Hawkins
Bioinformatics, Volume 21, Issue 10, May 2005, Pages 2279–2286, https://doi.org/10.1093/bioinformatics/bti372
Published: 03 March 2005