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Authors: Shinichi Sunagawa
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Journal Article

mBARq: a versatile and user-friendly framework for the analysis of DNA barcodes from transposon insertion libraries, knockout mutants, and isogenic strain populations

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Anna Sintsova and others
Bioinformatics, Volume 40, Issue 2, February 2024, btae078, https://doi.org/10.1093/bioinformatics/btae078
Published: 10 February 2024
Journal Article

metaSNV v2: detection of SNVs and subspecies in prokaryotic metagenomes

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Thea Van Rossum and others
Bioinformatics, Volume 38, Issue 4, February 2022, Pages 1162–1164, https://doi.org/10.1093/bioinformatics/btab789
Published: 17 November 2021
Journal Article

mTAGs: taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA genes

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Guillem Salazar and others
Bioinformatics, Volume 38, Issue 1, January 2022, Pages 270–272, https://doi.org/10.1093/bioinformatics/btab465
Published: 13 July 2021
Journal Article

MOCAT2: a metagenomic assembly, annotation and profiling framework

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Jens Roat Kultima and others
Bioinformatics, Volume 32, Issue 16, August 2016, Pages 2520–2523, https://doi.org/10.1093/bioinformatics/btw183
Published: 08 April 2016