1-20 of 27
Authors: Ziv Bar-Joseph
Journal Article
Deriving spatial features from in situ proteomics imaging to enhance cancer survival analysis
Bioinformatics, Volume 39, Issue Supplement_1, June 2023, Pages i140–i148, https://doi.org/10.1093/bioinformatics/btad245
Published: 30 June 2023
Journal Article
Clustering spatial transcriptomics data
Bioinformatics, Volume 38, Issue 4, February 2022, Pages 997–1004, https://doi.org/10.1093/bioinformatics/btab704
Published: 08 October 2021
Journal Article
Identifying signaling genes in spatial single-cell expression data
Bioinformatics, Volume 37, Issue 7, March 2021, Pages 968–975, https://doi.org/10.1093/bioinformatics/btaa769
Published: 14 December 2020
Journal Article
Continuous-state HMMs for modeling time-series single-cell RNA-Seq data
Bioinformatics, Volume 35, Issue 22, November 2019, Pages 4707–4715, https://doi.org/10.1093/bioinformatics/btz296
Published: 30 April 2019
Journal Article
Dhaka: variational autoencoder for unmasking tumor heterogeneity from single cell genomic data
Bioinformatics, Volume 37, Issue 11, June 2021, Pages 1535–1543, https://doi.org/10.1093/bioinformatics/btz095
Published: 15 February 2019
Journal Article
MethRaFo: MeDIP-seq methylation estimate using a Random Forest Regressor
Bioinformatics, Volume 33, Issue 21, November 012017, Pages 3477–3479, https://doi.org/10.1093/bioinformatics/btx449
Published: 13 July 2017
Journal Article
TASIC: determining branching models from time series single cell data
Bioinformatics, Volume 33, Issue 16, August 2017, Pages 2504–2512, https://doi.org/10.1093/bioinformatics/btx173
Published: 04 April 2017
Journal Article
Genome wide predictions of miRNA regulation by transcription factors
Bioinformatics, Volume 32, Issue 17, September 2016, Pages i746–i754, https://doi.org/10.1093/bioinformatics/btw452
Published: 29 August 2016
Journal Article
Reconstructing the temporal progression of HIV-1 immune response pathways
Bioinformatics, Volume 32, Issue 12, June 2016, Pages i253–i261, https://doi.org/10.1093/bioinformatics/btw254
Published: 11 June 2016
Journal Article
SMARTS: reconstructing disease response networks from multiple individuals using time series gene expression data
Bioinformatics, Volume 31, Issue 8, April 2015, Pages 1250–1257, https://doi.org/10.1093/bioinformatics/btu800
Published: 04 December 2014
Journal Article
A high-throughput framework to detect synapses in electron microscopy images
Bioinformatics, Volume 29, Issue 13, July 2013, Pages i9–i17, https://doi.org/10.1093/bioinformatics/btt222
Published: 19 June 2013
Journal Article
Integrating sequence, expression and interaction data to determine condition-specific miRNA regulation
Bioinformatics, Volume 29, Issue 13, July 2013, Pages i89–i97, https://doi.org/10.1093/bioinformatics/btt231
Published: 19 June 2013
Journal Article
Identifying proteins controlling key disease signaling pathways
Bioinformatics, Volume 29, Issue 13, July 2013, Pages i227–i236, https://doi.org/10.1093/bioinformatics/btt241
Published: 19 June 2013
Journal Article
Matching experiments across species using expression values and textual information
Bioinformatics, Volume 28, Issue 12, June 2012, Pages i258–i264, https://doi.org/10.1093/bioinformatics/bts205
Published: 09 June 2012
Journal Article
DECOD: fast and accurate discriminative DNA motif finding
Bioinformatics, Volume 27, Issue 17, September 2011, Pages 2361–2367, https://doi.org/10.1093/bioinformatics/btr412
Published: 12 July 2011
Journal Article
Cross-species queries of large gene expression databases
Bioinformatics, Volume 26, Issue 19, October 2010, Pages 2416–2423, https://doi.org/10.1093/bioinformatics/btq451
Published: 11 August 2010
Journal Article
Cross species analysis of microarray expression data
Bioinformatics, Volume 25, Issue 12, June 2009, Pages 1476–1483, https://doi.org/10.1093/bioinformatics/btp247
Published: 08 April 2009
Journal Article
Alignment and classification of time series gene expression in clinical studies
Bioinformatics, Volume 24, Issue 13, July 2008, Pages i147–i155, https://doi.org/10.1093/bioinformatics/btn152
Published: 01 July 2008
Journal Article
Protein complex identification by supervised graph local clustering
Bioinformatics, Volume 24, Issue 13, July 2008, Pages i250–i268, https://doi.org/10.1093/bioinformatics/btn164
Published: 01 July 2008
Journal Article
Continuous hidden process model for time series expression experiments
Bioinformatics, Volume 23, Issue 13, July 2007, Pages i459–i467, https://doi.org/10.1093/bioinformatics/btm218
Published: 01 July 2007
