Advance articles
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Corrected Proof
Research Article 13 April 2024
Complex Polyploids: Origins, Genomic Composition, and Role of Introgressed Alleles
J Luis Leal and othersSystematic Biology, syae012, https://doi.org/10.1093/sysbio/syae012Published: 13 April 2024 Section: Regular Manuscript -
Accepted Manuscript
Research Article 10 April 2024
Museum genomics reveals the hybrid origin of an extinct crater lake endemic
Amy R Tims and othersSystematic Biology, syae017, https://doi.org/10.1093/sysbio/syae017Published: 10 April 2024 Section: Spotlight Article -
Corrected Proof
Research Article 5 April 2024
Museum Skins Enable Identification of Introgression Associated with Cytonuclear Discordance
Sally Potter and othersSystematic Biology, syae016, https://doi.org/10.1093/sysbio/syae016Published: 5 April 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 30 March 2024
The Sequential Direct and Indirect Effects of Mountain Uplift, Climatic Niche, and Floral Trait Evolution on Diversification Dynamics in an Andean Plant Clade
Agnes S Dellinger and othersSystematic Biology, syae011, https://doi.org/10.1093/sysbio/syae011Published: 30 March 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 20 March 2024
DateLife: Leveraging Databases and Analytical Tools to Reveal the Dated Tree of Life
Luna L Sánchez Reyes and othersSystematic Biology, syae015, https://doi.org/10.1093/sysbio/syae015Published: 20 March 2024 Section: Software for Systematics and Evolution -
Corrected Proof
Research Article 15 March 2024
Considering Decoupled Phenotypic Diversification Between Ontogenetic Phases in Macroevolution: An Example Using Triggerfishes (Balistidae)
Alex Dornburg and othersSystematic Biology, syae014, https://doi.org/10.1093/sysbio/syae014Published: 15 March 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 13 March 2024
Distinguishing Cophylogenetic Signal from Phylogenetic Congruence Clarifies the Interplay Between Evolutionary History and Species Interactions
Benoît Perez-Lamarque and Hélène MorlonSystematic Biology, syae013, https://doi.org/10.1093/sysbio/syae013Published: 13 March 2024 Section: POINT OF VIEW -
Corrected Proof
Research Article 9 March 2024
Ecological Predictors of Organelle Genome Evolution: Phylogenetic Correlations with Taxonomically Broad, Sparse, Unsystematized Data
Konstantinos Giannakis and othersSystematic Biology, syae009, https://doi.org/10.1093/sysbio/syae009Published: 9 March 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 8 March 2024
Phylogenomics of Neogastropoda: The Backbone Hidden in the Bush
Alexander E Fedosov and othersSystematic Biology, syae010, https://doi.org/10.1093/sysbio/syae010Published: 8 March 2024 Section: Spotlight Article -
Corrected Proof
Research Article 29 February 2024
MAST: Phylogenetic Inference with Mixtures Across Sites and Trees
Thomas K F Wong and othersSystematic Biology, syae008, https://doi.org/10.1093/sysbio/syae008Published: 29 February 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 17 February 2024
Clockor2: Inferring Global and Local Strict Molecular Clocks Using Root-to-Tip Regression
Leo A Featherstone and othersSystematic Biology, syae003, https://doi.org/10.1093/sysbio/syae003Published: 17 February 2024 Section: Software for Systematics and Evolution -
Corrected Proof
Research Article 8 February 2024
The Effect of Copy Number Hemiplasy on Gene Family Evolution
Qiuyi Li and othersSystematic Biology, syae007, https://doi.org/10.1093/sysbio/syae007Published: 8 February 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 6 February 2024
Dating in the Dark: Elevated Substitution Rates in Cave Cockroaches (Blattodea: Nocticolidae) Have Negative Impacts on Molecular Date Estimates
Toby G L Kovacs and othersSystematic Biology, syae002, https://doi.org/10.1093/sysbio/syae002Published: 6 February 2024 Section: Spotlight Article -
Corrected Proof
Research Article 30 January 2024
The Evolution of Multiple Color Mechanisms Is Correlated with Diversification in Sunbirds (Nectariniidae)
Michaël P J Nicolaï and othersSystematic Biology, syae006, https://doi.org/10.1093/sysbio/syae006Published: 30 January 2024 Section: Regular Manuscript -
Accepted Manuscript
Research Article 29 January 2024
Bayesian Phylogenetic Analysis on multi-core Compute Architectures: Implementation and evaluation of BEAGLE in RevBayes with MPI
Killian Smith and othersSystematic Biology, syae005, https://doi.org/10.1093/sysbio/syae005Published: 29 January 2024 Section: Software for Systematics and Evolution -
Corrected Proof
Research Article 23 January 2024
Tropical Origin, Global Diversification, and Dispersal in the Pond Damselflies (Coenagrionoidea) Revealed by a New Molecular Phylogeny
Beatriz Willink and othersSystematic Biology, syae004, https://doi.org/10.1093/sysbio/syae004Published: 23 January 2024 Section: Spotlight Article -
Corrected Proof
Research Article 15 January 2024
Detection of Ghost Introgression Requires Exploiting Topological and Branch Length Information
Xiao-Xu Pang and Da-Yong ZhangSystematic Biology, syad077, https://doi.org/10.1093/sysbio/syad077Published: 15 January 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 8 January 2024
Gene Flow and Isolation in the Arid Nearctic Revealed by Genomic Analyses of Desert Spiny Lizards
Carlos J Pavón-Vázquez and othersSystematic Biology, syae001, https://doi.org/10.1093/sysbio/syae001Published: 8 January 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 8 January 2024
Deep Learning and Likelihood Approaches for Viral Phylogeography Converge on the Same Answers Whether the Inference Model Is Right or Wrong
Ammon Thompson and othersSystematic Biology, syad074, https://doi.org/10.1093/sysbio/syad074Published: 8 January 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 3 January 2024
Artifactual Orthologs and the Need for Diligent Data Exploration in Complex Phylogenomic Datasets: A Museomic Case Study from the Andean Flora
Laura A Frost and othersSystematic Biology, syad076, https://doi.org/10.1093/sysbio/syad076Published: 3 January 2024 Section: Regular Manuscript -
Corrected Proof
Research Article 29 December 2023
Phylogenetic Conflict Between Species Tree and Maternally Inherited Gene Trees in a Clade of Emberiza Buntings (Aves: Emberizidae)
Dezhi Zhang and othersSystematic Biology, syad078, https://doi.org/10.1093/sysbio/syad078Published: 29 December 2023 Section: Spotlight Article -
Corrected Proof
Research Article 28 December 2023
The Limits of the Constant-rate Birth–Death Prior for Phylogenetic Tree Topology Inference
Mark P Khurana and othersSystematic Biology, syad075, https://doi.org/10.1093/sysbio/syad075Published: 28 December 2023 Section: POINT OF VIEW -
Corrected Proof
Research Article 23 December 2023
Alpine Extremophytes in Evolutionary Turmoil: Complex Diversification Patterns and Demographic Responses of a Halophilic Grass in a Central Asian Biodiversity Hotspot
Anna Wróbel and othersSystematic Biology, syad073, https://doi.org/10.1093/sysbio/syad073Published: 23 December 2023 Section: Spotlight Article -
Corrected Proof
Research Article 15 December 2023
Phylogenetic Biodiversity Metrics Should Account for Both Accumulation and Attrition of Evolutionary Heritage
James Rosindell and othersSystematic Biology, syad072, https://doi.org/10.1093/sysbio/syad072Published: 15 December 2023 Section: Original Article -
Corrected Proof
Research Article 12 December 2023
Fast Bayesian Inference of Phylogenies from Multiple Continuous Characters
Rong Zhang and othersSystematic Biology, syad067, https://doi.org/10.1093/sysbio/syad067Published: 12 December 2023 Section: Regular Manuscript -
Corrected Proof
Research Article 2 December 2023
Bayesian Total-Evidence Dating Revisits Sloth Phylogeny and Biogeography: A Cautionary Tale on Morphological Clock Analyses
Julia V Tejada and othersSystematic Biology, syad069, https://doi.org/10.1093/sysbio/syad069Published: 2 December 2023 Section: Regular Manuscript -
Corrected Proof
Research Article 30 November 2023
Robust Phylogenetic Regression
Richard Adams and othersSystematic Biology, syad070, https://doi.org/10.1093/sysbio/syad070Published: 30 November 2023 Section: Regular Manuscript -
Accepted Manuscript
Research Article 13 November 2023
DNA sequences from type specimens and type strains – how to increase their number and improve their annotation in NCBI GenBank and related databases
Susanne S Renner and othersSystematic Biology, syad068, https://doi.org/10.1093/sysbio/syad068Published: 13 November 2023 Section: POINT OF VIEW -
Corrected Proof
Research Article 6 November 2023
Convergent Adaptation of True Crabs (Decapoda: Brachyura) to a Gradient of Terrestrial Environments
Joanna M Wolfe and othersSystematic Biology, syad066, https://doi.org/10.1093/sysbio/syad066Published: 6 November 2023 Section: Spotlight Article -
Corrected Proof
Research Article 26 October 2023
Reference Genome Choice and Filtering Thresholds Jointly Influence Phylogenomic Analyses
Jessica A Rick and othersSystematic Biology, syad065, https://doi.org/10.1093/sysbio/syad065Published: 26 October 2023 Section: Original Article -
Corrected Proof
Research Article 25 October 2023
River Drainage Reorganization and Reticulate Evolution in the Two-Lined Salamander (Eurycea bislineata) Species Complex
Todd W Pierson and othersSystematic Biology, syad064, https://doi.org/10.1093/sysbio/syad064Published: 25 October 2023 Section: Spotlight Article -
Corrected Proof
Research Article 16 October 2023
Is Over-parameterization a Problem for Profile Mixture Models?
Hector Baños and othersSystematic Biology, syad063, https://doi.org/10.1093/sysbio/syad063Published: 16 October 2023 Section: Original Article -
Corrected Proof
Research Article 6 October 2023
Geogenomic Predictors of Genetree Heterogeneity Explain Phylogeographic and Introgression History: A Case Study in an Amazonian Bird (Thamnophilus aethiops)
Lukas J Musher and othersSystematic Biology, syad061, https://doi.org/10.1093/sysbio/syad061Published: 6 October 2023 Section: Regular Manuscript -
Corrected Proof
Research Article 6 October 2023
Introgression Underlies Phylogenetic Uncertainty But Not Parallel Plumage Evolution in a Recent Songbird Radiation
Loïs Rancilhac and othersSystematic Biology, syad062, https://doi.org/10.1093/sysbio/syad062Published: 6 October 2023 Section: Spotlight Article -
Corrected Proof
Research Article 11 September 2023
Two Notorious Nodes: A Critical Examination of Relaxed Molecular Clock Age Estimates of the Bilaterian Animals and Placental Mammals
Graham E Budd and Richard P MannSystematic Biology, syad057, https://doi.org/10.1093/sysbio/syad057Published: 11 September 2023 Section: POINT OF VIEW -
Corrected Proof
Research Article 1 August 2023
Populating a Continent: Phylogenomics Reveal the Timing of Australian Frog Diversification
Ian G Brennan and othersSystematic Biology, syad048, https://doi.org/10.1093/sysbio/syad048Published: 1 August 2023 Section: Spotlight Article -
Corrected Proof
Research Article 7 July 2021
Concordance-Based Approaches for the Inference of Relationships and Molecular Rates with Phylogenomic Data Sets
Joseph F Walker and othersSystematic Biology, Volume 71, Issue 4, 7 July 2021, Pages 943–958, https://doi.org/10.1093/sysbio/syab052Published: 7 July 2021 Section: Special Issue