Summary: DaliLite is a program for pairwise structure comparison and for structure database searching. It is a standalone version of the search engine of the popular Dali server. A web interface is provided to view the results, multiple alignments and 3D superimpositions of structures.
Availability: DaliLite has been ported to the Linux and Irix operating systems and can be compiled in many other UNIX operating systems. It is found at http://www.embl-ebi.ac.uk/dali/DaliLite.