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M. Hucka, and the rest of the SBML Forum:, A. Finney, and the rest of the SBML Forum:, H. M. Sauro, and the rest of the SBML Forum:, H. Bolouri, and the rest of the SBML Forum:, J. C. Doyle, and the rest of the SBML Forum:, H. Kitano, and the rest of the SBML Forum:, A. P. Arkin, and the rest of the SBML Forum:, B. J. Bornstein, and the rest of the SBML Forum:, D. Bray, and the rest of the SBML Forum:, A. Cornish-Bowden, and the rest of the SBML Forum:, A. A. Cuellar, and the rest of the SBML Forum:, S. Dronov, and the rest of the SBML Forum:, E. D. Gilles, and the rest of the SBML Forum:, M. Ginkel, and the rest of the SBML Forum:, V. Gor, and the rest of the SBML Forum:, I. I. Goryanin, and the rest of the SBML Forum:, W. J. Hedley, and the rest of the SBML Forum:, T. C. Hodgman, and the rest of the SBML Forum:, J.-H. Hofmeyr, and the rest of the SBML Forum:, P. J. Hunter, and the rest of the SBML Forum:, N. S. Juty, and the rest of the SBML Forum:, J. L. Kasberger, and the rest of the SBML Forum:, A. Kremling, and the rest of the SBML Forum:, U. Kummer, and the rest of the SBML Forum:, N. Le Novère, and the rest of the SBML Forum:, L. M. Loew, and the rest of the SBML Forum:, D. Lucio, and the rest of the SBML Forum:, P. Mendes, and the rest of the SBML Forum:, E. Minch, and the rest of the SBML Forum:, E. D. Mjolsness, and the rest of the SBML Forum:, Y. Nakayama, and the rest of the SBML Forum:, M. R. Nelson, and the rest of the SBML Forum:, P. F. Nielsen, and the rest of the SBML Forum:, T. Sakurada, and the rest of the SBML Forum:, J. C. Schaff, and the rest of the SBML Forum:, B. E. Shapiro, and the rest of the SBML Forum:, T. S. Shimizu, and the rest of the SBML Forum:, H. D. Spence, and the rest of the SBML Forum:, J. Stelling, and the rest of the SBML Forum:, K. Takahashi, and the rest of the SBML Forum:, M. Tomita, and the rest of the SBML Forum:, J. Wagner, and the rest of the SBML Forum:, J. Wang, and the rest of the SBML Forum:; The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models, Bioinformatics, Volume 19, Issue 4, 1 March 2003, Pages 524–531, https://doi.org/10.1093/bioinformatics/btg015
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Abstract
Motivation: Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively.
Results: We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others.
Availability: The specification of SBML Level 1 is freely available from http://www.sbml.org/
Contact: sysbio-team@caltech.edu
To whom correspondence should be addressed.
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