-
PDF
- Split View
-
Views
-
Cite
Cite
Timothy M Uyeki, Henry H Bernstein, John S Bradley, Janet A Englund, Thomas M File, Alicia M Fry, Stefan Gravenstein, Frederick G Hayden, Scott A Harper, Jon Mark Hirshon, Michael G Ison, B Lynn Johnston, Shandra L Knight, Allison McGeer, Laura E Riley, Cameron R Wolfe, Paul E Alexander, Andrew T Pavia, Clinical Practice Guidelines by the Infectious Diseases Society of America: 2018 Update on Diagnosis, Treatment, Chemoprophylaxis, and Institutional Outbreak Management of Seasonal Influenza, Clinical Infectious Diseases, Volume 68, Issue 6, 15 March 2019, Pages 895–902, https://doi.org/10.1093/cid/ciy874
- Share Icon Share
EXECUTIVE SUMMARY
Seasonal influenza A and B virus epidemics are associated with significant morbidity and mortality each year in the United States and worldwide. One study estimated that during 2010–2016, the seasonal incidence of symptomatic influenza among all ages in the United States was approximately 8% and varied from 3% to 11% [1]. Most people recover from uncomplicated influenza, but influenza can cause complications that result in severe illness and death, particularly among very young children, older adults, pregnant and postpartum women within 2 weeks of delivery, people with neurologic disorders, and people with certain chronic medical conditions including chronic pulmonary, cardiac, and metabolic disease, and those who are immunocompromised [2–8]. During 2010–2018, seasonal influenza epidemics were associated with an estimated 4.3–23 million medical visits, 140 000–960 000 hospitalizations, and 12 000–79 000 respiratory and circulatory deaths each year in the United States [9]. A recent modeling study estimated that 291 243–645 832 seasonal influenza–associated respiratory deaths occur annually worldwide [10].
Use of available diagnostic modalities and proper interpretation of results can accurately identify patients presenting with influenza. Timely diagnosis may decrease unnecessary laboratory testing for other etiologies and use of antibiotics, improve the effectiveness of infection prevention and control measures, and increase appropriate use of antiviral medications [11, 12]. Early treatment with antivirals reduces the duration of symptoms and risk of some complications (bronchitis, otitis media, and pneumonia) and hospitalization, and may decrease mortality among high-risk populations [13–16]. Annual vaccination is the best method for preventing or mitigating the impact of influenza, but in certain situations, chemoprophylaxis with antiviral medications can be used for preexposure or postexposure prevention and can help control outbreaks in certain populations.
These clinical practice guidelines are an update of the guidelines published by the Infectious Diseases Society of America (IDSA) in 2009 [17]. The guidelines consider the care of children, pregnant and postpartum women, and nonpregnant adults and include special considerations for patients who are severely immunocompromised such as hematopoietic stem cell and solid organ transplant recipients. The target audience includes primary care clinicians, obstetricians, emergency medicine providers, hospitalists, and infectious disease specialists. The guidelines may be also useful for occupational health physicians and clinicians working in long-term care facilities. It adds new information on diagnostic testing, use of antivirals, and considerations of when to use antibiotics and when to test for antiviral resistance, and presents evidence on harm associated with routine use of corticosteroids.
The panel followed a process used in the development of previous IDSA guidelines that included a systematic weighting of the strength of recommendations and quality of evidence based upon the US Public Health Service Grading System for ranking recommendations in clinical guidelines as utilized in the previous 2009 guidelines (Table 1) [17]. Summarized below are the recommendations. A detailed description of background, methods, evidence summary, and rationale that support each recommendation, and research needs are included in the full document.
Infectious Diseases Society of America–US Public Health Service Grading System for Ranking Recommendations in Clinical Guidelines
Category and Grade . | Definition . |
---|---|
Strength of recommendation | |
A | Good evidence to support a recommendation for or against use |
B | Moderate evidence to support a recommendation for or against use |
C | Poor evidence to support a recommendation |
Quality of evidence | |
I | Evidence from 1 or more properly randomized controlled trials |
II | Evidence from 1 or more well-designed clinical trials, without randomization; from cohort or case-controlled analytic studies (preferably from >1 center); from multiple time-series; or from dramatic results from uncontrolled experiments |
III | Evidence from opinions of respected authorities, based on clinical experience, descriptive studies, or reports of expert committees |
Category and Grade . | Definition . |
---|---|
Strength of recommendation | |
A | Good evidence to support a recommendation for or against use |
B | Moderate evidence to support a recommendation for or against use |
C | Poor evidence to support a recommendation |
Quality of evidence | |
I | Evidence from 1 or more properly randomized controlled trials |
II | Evidence from 1 or more well-designed clinical trials, without randomization; from cohort or case-controlled analytic studies (preferably from >1 center); from multiple time-series; or from dramatic results from uncontrolled experiments |
III | Evidence from opinions of respected authorities, based on clinical experience, descriptive studies, or reports of expert committees |
Adapted from the Canadian Task Force on the Periodic Health Examination [6].
Infectious Diseases Society of America–US Public Health Service Grading System for Ranking Recommendations in Clinical Guidelines
Category and Grade . | Definition . |
---|---|
Strength of recommendation | |
A | Good evidence to support a recommendation for or against use |
B | Moderate evidence to support a recommendation for or against use |
C | Poor evidence to support a recommendation |
Quality of evidence | |
I | Evidence from 1 or more properly randomized controlled trials |
II | Evidence from 1 or more well-designed clinical trials, without randomization; from cohort or case-controlled analytic studies (preferably from >1 center); from multiple time-series; or from dramatic results from uncontrolled experiments |
III | Evidence from opinions of respected authorities, based on clinical experience, descriptive studies, or reports of expert committees |
Category and Grade . | Definition . |
---|---|
Strength of recommendation | |
A | Good evidence to support a recommendation for or against use |
B | Moderate evidence to support a recommendation for or against use |
C | Poor evidence to support a recommendation |
Quality of evidence | |
I | Evidence from 1 or more properly randomized controlled trials |
II | Evidence from 1 or more well-designed clinical trials, without randomization; from cohort or case-controlled analytic studies (preferably from >1 center); from multiple time-series; or from dramatic results from uncontrolled experiments |
III | Evidence from opinions of respected authorities, based on clinical experience, descriptive studies, or reports of expert committees |
Adapted from the Canadian Task Force on the Periodic Health Examination [6].
Because prevention and control of influenza is a dynamic field, clinicians should consult the website of the Centers for Disease Control and Prevention (CDC) for the latest information about influenza vaccines, influenza tests, and approved antiviral medications.
DIAGNOSIS
Which Patients Should Be Tested for Influenza?
Recommendations
Outpatients (including emergency department patients).
1. During influenza activity (defined as the circulation of seasonal influenza A and B viruses among persons in the local community):
Clinicians should test for influenza in high-risk patients, including immunocompromised persons who present with influenza-like illness, pneumonia, or nonspecific respiratory illness (eg, cough without fever) if the testing result will influence clinical management (A-III).
Clinicians should test for influenza in patients who present with acute onset of respiratory symptoms with or without fever, and either exacerbation of chronic medical conditions (eg, asthma, chronic obstructive pulmonary disease [COPD], heart failure) or known complications of influenza (eg, pneumonia) if the testing result will influence clinical management (A-III) (see Table 3).
Clinicians can consider influenza testing for patients not at high risk for influenza complications who present with influenza-like illness, pneumonia, or nonspecific respiratory illness (eg, cough without fever) and who are likely to be discharged home if the results might influence antiviral treatment decisions or reduce use of unnecessary antibiotics, further diagnostic testing, and time in the emergency department, or if the results might influence antiviral treatment or chemoprophylaxis decisions for high-risk household contacts (see recommendations 40–42) (C-III).
2. During low influenza activity without any link to an influenza outbreak:
Clinicians can consider influenza testing in patients with acute onset of respiratory symptoms with or without fever, especially for immunocompromised and high-risk patients (B-III).
Population | Clinical Manifestation/Complication |
Infants and preschool children | Fever without respiratory complications, “sepsis-like syndrome” Otitis media Parotitis Bronchiolitis Croup Reactive airway disease Pneumonia Myocarditis, pericarditis Rhabdomyolysis Febrile seizures Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin exposure) Sudden death Exacerbation of chronic disease |
School-aged children | Otitis media Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis (bilateral gastrocnemius, soleus) Rhabdomyolysis Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin use) Toxic shock syndrome Sudden death Exacerbation of chronic disease |
Adults | Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis Rhabdomyolysis Invasive bacterial coinfection Invasive fungal coinfection (rare) Toxic shock syndrome due to Staphylococcus aureus or Streptococcus pyogenes Precipitation of acute cardiovascular events (eg, cardiac failure, myocardial infarction, heart failure, cerebrovascular accident) Acute kidney injury and acute renal failure (with rhabdomyolysis or multiorgan failure) Encephalopathy and encephalitis Exacerbation of chronic disease |
Elderly patients | Pneumonia Invasive bacterial coinfection Myositis Exacerbation of chronic disease |
Special groups: pregnant and postpartum women | Dehydration Pneumonia Cardiopulmonary disease Premature labor Fetal loss |
Special groups: immunocompromised, immunosuppressed | Complications similar to immunocompetent patients, but severe pneumonia and acute respiratory distress syndrome may be more common. |
All ages | Respiratory failure Acute respiratory distress syndrome Multiorgan failure Sepsis Liver inflammation |
Population | Clinical Manifestation/Complication |
Infants and preschool children | Fever without respiratory complications, “sepsis-like syndrome” Otitis media Parotitis Bronchiolitis Croup Reactive airway disease Pneumonia Myocarditis, pericarditis Rhabdomyolysis Febrile seizures Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin exposure) Sudden death Exacerbation of chronic disease |
School-aged children | Otitis media Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis (bilateral gastrocnemius, soleus) Rhabdomyolysis Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin use) Toxic shock syndrome Sudden death Exacerbation of chronic disease |
Adults | Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis Rhabdomyolysis Invasive bacterial coinfection Invasive fungal coinfection (rare) Toxic shock syndrome due to Staphylococcus aureus or Streptococcus pyogenes Precipitation of acute cardiovascular events (eg, cardiac failure, myocardial infarction, heart failure, cerebrovascular accident) Acute kidney injury and acute renal failure (with rhabdomyolysis or multiorgan failure) Encephalopathy and encephalitis Exacerbation of chronic disease |
Elderly patients | Pneumonia Invasive bacterial coinfection Myositis Exacerbation of chronic disease |
Special groups: pregnant and postpartum women | Dehydration Pneumonia Cardiopulmonary disease Premature labor Fetal loss |
Special groups: immunocompromised, immunosuppressed | Complications similar to immunocompetent patients, but severe pneumonia and acute respiratory distress syndrome may be more common. |
All ages | Respiratory failure Acute respiratory distress syndrome Multiorgan failure Sepsis Liver inflammation |
Adapted from Jani AA, Uyeki TM. Chapter 46. Influenza. In: Emergency management of infectious diseases. 2nd ed. Chin RL, ed. Cambridge, UK: Cambridge University Press, 2018.
Population | Clinical Manifestation/Complication |
Infants and preschool children | Fever without respiratory complications, “sepsis-like syndrome” Otitis media Parotitis Bronchiolitis Croup Reactive airway disease Pneumonia Myocarditis, pericarditis Rhabdomyolysis Febrile seizures Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin exposure) Sudden death Exacerbation of chronic disease |
School-aged children | Otitis media Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis (bilateral gastrocnemius, soleus) Rhabdomyolysis Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin use) Toxic shock syndrome Sudden death Exacerbation of chronic disease |
Adults | Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis Rhabdomyolysis Invasive bacterial coinfection Invasive fungal coinfection (rare) Toxic shock syndrome due to Staphylococcus aureus or Streptococcus pyogenes Precipitation of acute cardiovascular events (eg, cardiac failure, myocardial infarction, heart failure, cerebrovascular accident) Acute kidney injury and acute renal failure (with rhabdomyolysis or multiorgan failure) Encephalopathy and encephalitis Exacerbation of chronic disease |
Elderly patients | Pneumonia Invasive bacterial coinfection Myositis Exacerbation of chronic disease |
Special groups: pregnant and postpartum women | Dehydration Pneumonia Cardiopulmonary disease Premature labor Fetal loss |
Special groups: immunocompromised, immunosuppressed | Complications similar to immunocompetent patients, but severe pneumonia and acute respiratory distress syndrome may be more common. |
All ages | Respiratory failure Acute respiratory distress syndrome Multiorgan failure Sepsis Liver inflammation |
Population | Clinical Manifestation/Complication |
Infants and preschool children | Fever without respiratory complications, “sepsis-like syndrome” Otitis media Parotitis Bronchiolitis Croup Reactive airway disease Pneumonia Myocarditis, pericarditis Rhabdomyolysis Febrile seizures Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin exposure) Sudden death Exacerbation of chronic disease |
School-aged children | Otitis media Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis (bilateral gastrocnemius, soleus) Rhabdomyolysis Encephalopathy and encephalitis Invasive bacterial coinfection Reye syndrome (with aspirin use) Toxic shock syndrome Sudden death Exacerbation of chronic disease |
Adults | Parotitis Bronchitis Sinusitis Reactive airway disease Pneumonia Myocarditis, pericarditis Myositis Rhabdomyolysis Invasive bacterial coinfection Invasive fungal coinfection (rare) Toxic shock syndrome due to Staphylococcus aureus or Streptococcus pyogenes Precipitation of acute cardiovascular events (eg, cardiac failure, myocardial infarction, heart failure, cerebrovascular accident) Acute kidney injury and acute renal failure (with rhabdomyolysis or multiorgan failure) Encephalopathy and encephalitis Exacerbation of chronic disease |
Elderly patients | Pneumonia Invasive bacterial coinfection Myositis Exacerbation of chronic disease |
Special groups: pregnant and postpartum women | Dehydration Pneumonia Cardiopulmonary disease Premature labor Fetal loss |
Special groups: immunocompromised, immunosuppressed | Complications similar to immunocompetent patients, but severe pneumonia and acute respiratory distress syndrome may be more common. |
All ages | Respiratory failure Acute respiratory distress syndrome Multiorgan failure Sepsis Liver inflammation |
Adapted from Jani AA, Uyeki TM. Chapter 46. Influenza. In: Emergency management of infectious diseases. 2nd ed. Chin RL, ed. Cambridge, UK: Cambridge University Press, 2018.
Hospitalized Patients.
3. During influenza activity:
Clinicians should test influenza on admission in all patients requiring hospitalization with acute respiratory illness, including pneumonia, with or without fever (A-II).
Clinicians should test for influenza on admission in all patients with acute worsening of chronic cardiopulmonary disease (eg, COPD, asthma, coronary artery disease, or heart failure), as influenza can be associated with exacerbation of underlying conditions (A-III).
Clinicians should test for influenza on admission in all patients who are immunocompromised or at high risk of complications and present with acute onset of respiratory symptoms with or without fever, as the manifestations of influenza in such patients are frequently less characteristic than in immunocompetent individuals (A-III).
Clinicians should test for influenza in all patients who, while hospitalized, develop acute onset of respiratory symptoms, with or without fever, or respiratory distress, without a clear alternative diagnosis (A-III).
4. During periods of low influenza activity:
Clinicians should test for influenza on admission in all patients requiring hospitalization with acute respiratory illness, with or without fever, who have an epidemiological link to a person diagnosed with influenza, an influenza outbreak or outbreak of acute febrile respiratory illness of uncertain cause, or who recently traveled from an area with known influenza activity (A-II).
Clinicians can consider testing for influenza in patients with acute, febrile respiratory tract illness, especially children and adults who are immunocompromised or at high risk of complications, or if the results might influence antiviral treatment or chemoprophylaxis decisions for high-risk household contacts (see recommendations 41–43) (B-III).
What Specimen(s) Should Be Collected When Testing Patients for Influenza?
Recommendations
5. Clinicians should collect upper respiratory tract specimens from outpatients for influenza testing as soon after illness onset as possible, preferably within 4 days of symptom onset (A-II).
Nasopharyngeal specimens should be collected over other upper respiratory tract specimens to increase detection of influenza viruses (A-II).
If nasopharyngeal specimens are not available, nasal and throat swab specimens should be collected and combined together for influenza testing over single specimens from either site (particularly over throat swabs) to increase detection of influenza viruses (A-II).
Mid-turbinate nasal swab specimens should be collected over throat swab specimens to increase detection of influenza viruses (A-II).
Flocked swab specimens should be collected over nonflocked swab specimens to improve detection of influenza viruses (A-II).
6. Clinicians should collect nasopharyngeal (optimally, as for outpatients), mid-turbinate nasal, or combined nasal–throat specimens from hospitalized patients without severe lower respiratory tract disease for influenza testing as soon as possible (A-II).
7. Clinicians should collect endotracheal aspirate or bronchoalveolar lavage fluid specimens from hospitalized patients with respiratory failure receiving mechanical ventilation, including patients with negative influenza testing results on upper respiratory tract specimens, for influenza testing as soon as possible (A-II).
8. Clinicians should not collect or routinely test specimens for influenza from nonrespiratory sites such as blood, plasma, serum, cerebrospinal fluid, urine, and stool (A-III).
9. Clinicians should not collect serum specimens, including single or paired sera, for serological diagnosis of seasonal influenza virus infection for clinical management purposes (A-III).
What Test(s) Should Be Used to Diagnose Influenza?
Recommendations
10. Clinicians should use rapid molecular assays (ie, nucleic acid amplification tests) over rapid influenza diagnostic tests (RIDTs) in outpatients to improve detection of influenza virus infection (A-II) (see Table 6).
11. Clinicians should use reverse-transcription polymerase chain reaction (RT-PCR) or other molecular assays over other influenza tests in hospitalized patients to improve detection of influenza virus infection (A-II) (see Table 6).
12. Clinicians should use multiplex RT-PCR assays targeting a panel of respiratory pathogens, including influenza viruses, in hospitalized immunocompromised patients (A-III).
13. Clinicians can consider using multiplex RT-PCR assays targeting a panel of respiratory pathogens, including influenza viruses, in hospitalized patients who are not immunocompromised if it might influence care (eg, aid in cohorting decisions, reduce testing, or decrease antibiotic use) (B-III).
14. Clinicians should not use immunofluorescence assays for influenza virus antigen detection in hospitalized patients except when more sensitive molecular assays are not available (A-II), and follow-up testing with RT-PCR or other molecular assays should be performed to confirm negative immunofluorescence test results (A-III).
15. Clinicians should not use RIDTs in hospitalized patients except when more sensitive molecular assays are not available (A-II), and follow-up testing with RT-PCR or other molecular assays should be performed to confirm negative RIDT results (A-II).
16. Clinicians should not use viral culture for initial or primary diagnosis of influenza because results will not be available in a timely manner to inform clinical management (A-III), but viral culture can be considered to confirm negative test results from RIDTs and immunofluorescence assays, such as during an institutional outbreak, and to provide isolates for further characterization (C-II).
17. Clinicians should not use serologic testing for diagnosis of influenza because results from a single serum specimen cannot be reliably interpreted, and collection of paired (acute/convalescent) sera 2–3 weeks apart are needed for serological testing (A-III).
Testing Category . | Method . | Influenza Viruses Detected . | Distinguishes Influenza A Virus Subtypes . | Time to Results . | Performance . |
---|---|---|---|---|---|
Rapid molecular assay | Nucleic acid amplification | Influenza A or B viral RNA | No | 15–30 minutes | High sensitivity; high specificity |
Rapid influenza diagnostic test | Antigen detection | Influenza A or B virus antigens | No | 10–15 minutes | Low to moderate sensitivity (higher with analyzer device); high specificity; |
Direct and indirect immunofluorescence assays | Antigen detection | Influenza A or B virus antigens | No | 1–4 hours | Moderate sensitivity; high specificity |
Molecular assays (including RT-PCR) | Nucleic acid amplification | Influenza A or B viral RNA | Yes, if subtype primers are used | 1–8 hours | High sensitivity; high specificity |
Multiplex molecular assays | Nucleic acid amplification | Influenza A or B viral RNA, other viral or bacterial targets (RNA or DNA) | Yes, if subtype primers are used | 1–2 hours | High sensitivity; high specificity |
Rapid cell culture (shell vial and cell mixtures) | Virus isolation | Influenza A or B virus | Yes | 1–3 days | High sensitivity; high specificity |
Viral culture (tissue cell culture) | Virus isolation | Influenza A or B virus | Yes | 3–10 days | High sensitivity; high specificity |
Testing Category . | Method . | Influenza Viruses Detected . | Distinguishes Influenza A Virus Subtypes . | Time to Results . | Performance . |
---|---|---|---|---|---|
Rapid molecular assay | Nucleic acid amplification | Influenza A or B viral RNA | No | 15–30 minutes | High sensitivity; high specificity |
Rapid influenza diagnostic test | Antigen detection | Influenza A or B virus antigens | No | 10–15 minutes | Low to moderate sensitivity (higher with analyzer device); high specificity; |
Direct and indirect immunofluorescence assays | Antigen detection | Influenza A or B virus antigens | No | 1–4 hours | Moderate sensitivity; high specificity |
Molecular assays (including RT-PCR) | Nucleic acid amplification | Influenza A or B viral RNA | Yes, if subtype primers are used | 1–8 hours | High sensitivity; high specificity |
Multiplex molecular assays | Nucleic acid amplification | Influenza A or B viral RNA, other viral or bacterial targets (RNA or DNA) | Yes, if subtype primers are used | 1–2 hours | High sensitivity; high specificity |
Rapid cell culture (shell vial and cell mixtures) | Virus isolation | Influenza A or B virus | Yes | 1–3 days | High sensitivity; high specificity |
Viral culture (tissue cell culture) | Virus isolation | Influenza A or B virus | Yes | 3–10 days | High sensitivity; high specificity |
Negative results may not rule out influenza. Respiratory tract specimens should be collected as close to illness onset as possible for testing. Clinicians should consult the manufacturer’s package insert for the specific test for the approved respiratory specimen(s). Most US Food and Drug Administration (FDA)–cleared influenza diagnostic tests are approved for upper respiratory tract specimens but not for sputum or lower respiratory tract specimens. Specificities are generally high (>90%) for all tests compared to RT-PCR. FDA-cleared rapid influenza diagnostic tests are Clinical Laboratory Improvement Amendments (CLIA)–waived; most FDA-cleared rapid influenza molecular assays are CLIA-waived, depending on the specimen.
Abbreviation: RT-PCR, reverse-transcription polymerase chain reaction.
Testing Category . | Method . | Influenza Viruses Detected . | Distinguishes Influenza A Virus Subtypes . | Time to Results . | Performance . |
---|---|---|---|---|---|
Rapid molecular assay | Nucleic acid amplification | Influenza A or B viral RNA | No | 15–30 minutes | High sensitivity; high specificity |
Rapid influenza diagnostic test | Antigen detection | Influenza A or B virus antigens | No | 10–15 minutes | Low to moderate sensitivity (higher with analyzer device); high specificity; |
Direct and indirect immunofluorescence assays | Antigen detection | Influenza A or B virus antigens | No | 1–4 hours | Moderate sensitivity; high specificity |
Molecular assays (including RT-PCR) | Nucleic acid amplification | Influenza A or B viral RNA | Yes, if subtype primers are used | 1–8 hours | High sensitivity; high specificity |
Multiplex molecular assays | Nucleic acid amplification | Influenza A or B viral RNA, other viral or bacterial targets (RNA or DNA) | Yes, if subtype primers are used | 1–2 hours | High sensitivity; high specificity |
Rapid cell culture (shell vial and cell mixtures) | Virus isolation | Influenza A or B virus | Yes | 1–3 days | High sensitivity; high specificity |
Viral culture (tissue cell culture) | Virus isolation | Influenza A or B virus | Yes | 3–10 days | High sensitivity; high specificity |
Testing Category . | Method . | Influenza Viruses Detected . | Distinguishes Influenza A Virus Subtypes . | Time to Results . | Performance . |
---|---|---|---|---|---|
Rapid molecular assay | Nucleic acid amplification | Influenza A or B viral RNA | No | 15–30 minutes | High sensitivity; high specificity |
Rapid influenza diagnostic test | Antigen detection | Influenza A or B virus antigens | No | 10–15 minutes | Low to moderate sensitivity (higher with analyzer device); high specificity; |
Direct and indirect immunofluorescence assays | Antigen detection | Influenza A or B virus antigens | No | 1–4 hours | Moderate sensitivity; high specificity |
Molecular assays (including RT-PCR) | Nucleic acid amplification | Influenza A or B viral RNA | Yes, if subtype primers are used | 1–8 hours | High sensitivity; high specificity |
Multiplex molecular assays | Nucleic acid amplification | Influenza A or B viral RNA, other viral or bacterial targets (RNA or DNA) | Yes, if subtype primers are used | 1–2 hours | High sensitivity; high specificity |
Rapid cell culture (shell vial and cell mixtures) | Virus isolation | Influenza A or B virus | Yes | 1–3 days | High sensitivity; high specificity |
Viral culture (tissue cell culture) | Virus isolation | Influenza A or B virus | Yes | 3–10 days | High sensitivity; high specificity |
Negative results may not rule out influenza. Respiratory tract specimens should be collected as close to illness onset as possible for testing. Clinicians should consult the manufacturer’s package insert for the specific test for the approved respiratory specimen(s). Most US Food and Drug Administration (FDA)–cleared influenza diagnostic tests are approved for upper respiratory tract specimens but not for sputum or lower respiratory tract specimens. Specificities are generally high (>90%) for all tests compared to RT-PCR. FDA-cleared rapid influenza diagnostic tests are Clinical Laboratory Improvement Amendments (CLIA)–waived; most FDA-cleared rapid influenza molecular assays are CLIA-waived, depending on the specimen.
Abbreviation: RT-PCR, reverse-transcription polymerase chain reaction.
TREATMENT
Which Patients With Suspected or Confirmed Influenza Should Be Treated With Antivirals?
Recommendations
18. Clinicians should start antiviral treatment as soon as possible for adults and children with documented or suspected influenza, irrespective of influenza vaccination history, who meet the following criteria:
Persons of any age who are hospitalized with influenza, regardless of illness duration prior to hospitalization (A-II).
Outpatients of any age with severe or progressive illness, regardless of illness duration (A-III).
Outpatients who are at high risk of complications from influenza, including those with chronic medical conditions and immunocompromised patients (A-II).
Children younger than 2 years and adults ≥65 years (A-III).
Pregnant women and those within 2 weeks postpartum (A-III).
19. Clinicians can consider antiviral treatment for adults and children who are not at high risk of influenza complications, with documented or suspected influenza, irrespective of influenza vaccination history, who are either:
Outpatients with illness onset ≤2 days before presentation (C-I).
Symptomatic outpatients who are household contacts of persons who are at high risk of developing complications from influenza, particularly those who are severely immunocompromised (C-III).
Symptomatic healthcare providers who care for patients who are at high risk of developing complications from influenza, particularly those who are severely immunocompromised (C-III).
For Patients Who Are Recommended to Receive Antiviral Treatment for Suspected or Confirmed Influenza, Which Antiviral Should Be Prescribed, at What Dosing, and for What Duration?
Recommendations
20. Clinicians should start antiviral treatment as soon as possible with a single neuraminidase inhibitor (NAI) (either oral oseltamivir, inhaled zanamivir, or intravenous peramivir) and not use a combination of NAIs (A-1).
21. Clinicians should not routinely use higher doses of US Food and Drug Administration–approved NAI drugs for the treatment of seasonal influenza (A-II).
22. Clinicians should treat uncomplicated influenza in otherwise healthy ambulatory patients for 5 days with oral oseltamivir or inhaled zanamivir, or a single dose of intravenous peramivir (A-1).
23. Clinicians can consider longer duration of antiviral treatment for patients with a documented or suspected immunocompromising condition or patients requiring hospitalization for severe lower respiratory tract disease (especially pneumonia or acute respiratory distress syndrome [ARDS]), as influenza viral replication is often protracted (C-III).
In a Patient With Suspected or Confirmed Influenza, When Should Bacterial Coinfection of the Upper or Lower Respiratory Tract Be Considered, Investigated, and Treated?
Recommendations
24. Clinicians should investigate and empirically treat bacterial coinfection in patients with suspected or laboratory-confirmed influenza who present initially with severe disease (extensive pneumonia, respiratory failure, hypotension, and fever), in addition to antiviral treatment for influenza (A-II).
25. Clinicians should investigate and empirically treat bacterial coinfection in patients who deteriorate after initial improvement, particularly in those treated with antivirals (A-III).
26. Clinicians can consider investigating bacterial coinfection in patients who fail to improve after 3–5 days of antiviral treatment (C-III).
If a Patient With Influenza Does Not Demonstrate Clinical Improvement With Antiviral Treatment or Demonstrates Clinical Deterioration During or After Treatment, What Additional Testing and Therapy Should Be Considered?
Recommendation
27. Clinicians should investigate other causes besides influenza virus infection in influenza patients who fail to improve or deteriorate despite antiviral treatment (A-III).
When Should Testing Be Done for Infection With an Antiviral-resistant Influenza Virus?
Recommendations
28. Influenza NAI resistance testing can be considered for:
Patients who develop laboratory-confirmed influenza while on or immediately after NAI chemoprophylaxis (C-III).
Patients with an immunocompromising condition and evidence of persistent influenza viral replication (eg, after 7–10 days, demonstrated by persistently positive RT-PCR or viral culture results) and remain ill during or after NAI treatment (B-III).
Patients with laboratory-confirmed influenza who inadvertently received subtherapeutic NAI dosing (C-III).
Patients with severe influenza who do not improve with NAI treatment and have evidence of persistent influenza viral replication (eg, after 7–10 days) (C-II).
29. Clinicians should remain informed on current CDC and World Health Organization surveillance data on the frequency and geographic distribution of NAI-resistant influenza viruses during influenza season, and with the latest CDC antiviral treatment recommendations (A-III).
Should Adjunctive Therapy Be Administered to Patients With Suspected or Confirmed Influenza?
Recommendations
30. Clinicians should not administer corticosteroid adjunctive therapy for the treatment of adults or children with suspected or confirmed seasonal influenza, influenza-associated pneumonia, respiratory failure, or ARDS, unless clinically indicated for other reasons (A-III).
31. Clinicians should not routinely administer immunomodulation using immunoglobulin preparations such as intravenous immunoglobulin for treatment of adults or children with suspected or confirmed seasonal influenza (A-III).
ANTIVIRAL CHEMOPROPHYLAXIS IN COMMUNITY SETTINGS
Who Should Be Considered for Antiviral Chemoprophylaxis to Prevent Influenza in the Absence of Exposure or an Institutional Outbreak (Preexposure Chemoprophylaxis)?
Recommendations
Antiviral drugs should not be used for routine or widespread chemoprophylaxis outside of institutional outbreaks; antiviral chemoprophylaxis can be considered in certain situations:
32. Clinicians can consider antiviral chemoprophylaxis for the duration of the influenza season for adults and children aged ≥3 months who are at very high risk of developing complications from influenza and for whom influenza vaccination is contraindicated, unavailable, or expected to have low effectiveness (eg, persons who are severely immunocompromised) (C-II).
33. Clinicians can consider antiviral chemoprophylaxis for the duration of the influenza season for adults and children aged ≥3 months who have the highest risk of influenza-associated complications, such as recipients of hematopoietic stem cell transplant in the first 6–12 months posttransplant and lung transplant recipients (B-II).
34. Clinicians can consider short-term antiviral chemoprophylaxis in conjunction with prompt administration of inactivated influenza vaccine for unvaccinated adults and children aged ≥3 months who are at high risk of developing complications from influenza in whom influenza vaccination is expected to be effective (but not yet administered) when influenza activity has been detected in the community (C-II).
35. Clinicians can consider short-term antiviral chemoprophylaxis for unvaccinated adults, including healthcare personnel, and for children aged ≥3 months who are in close contact with persons at high risk of developing influenza complications during periods of influenza activity when influenza vaccination is contraindicated or unavailable and these high-risk persons are unable to take antiviral chemoprophylaxis (C-III).
36. Clinicians can consider educating patients and parents of patients to arrange for early empiric initiation of antiviral treatment as an alternative to antiviral chemoprophylaxis (C-III).
Which Antiviral Drugs Should Be Used for Preexposure Chemoprophylaxis for Influenza?
Recommendation
37. Clinicians should use an NAI (oral oseltamivir or inhaled zanamivir) if preexposure chemoprophylaxis for influenza is administered rather than an adamantane antiviral (A-II).
What Is the Duration of Preexposure Antiviral Chemoprophylaxis to Prevent Influenza?
Recommendations
38. Clinicians should administer preexposure antiviral chemoprophylaxis for adults and children aged ≥3 months who are at very high risk of developing complications from influenza (eg, severely immunocompromised persons such as hematopoietic stem cell transplant recipients) for whom influenza vaccination is contraindicated, unavailable, or expected to have low effectiveness, as soon as influenza activity is detected in the community and continued for the duration of community influenza activity (A-II).
39. Clinicians should test for influenza and switch to antiviral treatment dosing in persons receiving preexposure antiviral chemoprophylaxis who become symptomatic, preferably with an antiviral drug with a different resistance profile if not contraindicated (A-II).
Which Asymptomatic Persons Exposed to Influenza Should Be Considered for Postexposure Antiviral Chemoprophylaxis in a Noninstitutional Setting?
Recommendations
40. Clinicians can consider postexposure antiviral chemoprophylaxis for asymptomatic adults and children aged ≥3 months who are at very high risk of developing complications from influenza (eg, severely immunocompromised persons) and for whom influenza vaccination is contraindicated, unavailable, or expected to have low effectiveness, after household exposure to influenza (C-II).
41. Clinicians can consider postexposure antiviral chemoprophylaxis (in conjunction with influenza vaccination) for adults and children aged ≥3 months who are unvaccinated and are household contacts of a person at very high risk of complications from influenza (eg, severely immunocompromised persons), after exposure to influenza (C-II).
42. Clinicians can consider educating patients and arranging for early empiric initiation of antiviral treatment as an alternative to postexposure antiviral chemoprophylaxis (C-III).
When Should Postexposure Antiviral Chemoprophylaxis Be Started?
Recommendations
43. If chemoprophylaxis is given, clinicians should administer postexposure antiviral chemoprophylaxis as soon as possible after exposure, ideally no later than 48 hours after exposure (A-III).
44. Clinicians should not administer once-daily postexposure antiviral chemoprophylaxis if >48 hours has elapsed since exposure. Full-dose empiric antiviral treatment should be initiated as soon as symptoms occur, if treatment is indicated (A-III).
How Long Should Postexposure Antiviral Chemoprophylaxis Be Given?
Recommendations
45. Clinicians should administer postexposure antiviral chemoprophylaxis in a nonoutbreak setting for 7 days after the most recent exposure to a close contact with influenza (A-III).
46. Clinicians should test for influenza and switch to antiviral treatment dosing in persons receiving postexposure antiviral chemoprophylaxis who become symptomatic, preferably with an antiviral drug with a different resistance profile if not contraindicated (A-III).
Which Antiviral Drugs Should Be Used for Postexposure Chemoprophylaxis?
Recommendation
47. Clinicians should administer an NAI (inhaled zanamivir or oral oseltamivir) if postexposure chemoprophylaxis for influenza is given, rather than an adamantane antiviral (A-II).
INSTITUTIONAL OUTBREAK CONTROL
When Is There Sufficient Evidence of an Influenza Outbreak in a Long-term Care Facility or Hospital to Trigger Implementation of Control Measures Among Exposed Residents or Patients and Healthcare Personnel to Prevent Additional Cases of Influenza?
Recommendations
48. Active surveillance for additional cases should be implemented as soon as possible when one healthcare-associated laboratory-confirmed influenza case is identified in a hospital or one case of laboratory-confirmed influenza is identified in a long-term care facility (A-III).
49. Outbreak control measures should be implemented as soon as possible, including antiviral chemoprophylaxis of residents/patients, and active surveillance for new cases, when 2 cases of healthcare-associated laboratory-confirmed influenza are identified within 72 hours of each other in residents or patients of the same ward or unit (A-III).
50. Implementation of outbreak control measures can be considered as soon as possible if one or more residents or patients has suspected healthcare-associated influenza and results of influenza molecular testing are not available on the day of specimen collection (B-III).
Which Residents/Patients Should Be Considered to Have Influenza and Be Treated With Antivirals During an Influenza Outbreak in a Long-term Care Facility or Hospital?
Recommendations
51. When an influenza outbreak has been identified in a long-term care facility or hospital, influenza testing should be done for any resident/patient with one or more acute respiratory symptoms, with or without fever, or any of the following without respiratory symptoms: temperature elevation or reduction, or behavioral change (A-III).
52. Empiric antiviral treatment should be administered as soon as possible to any resident or patient with suspected influenza during an influenza outbreak without waiting for the results of influenza diagnostic testing (A-III).
To Control an Influenza Outbreak in a Long-term Care Facility or Hospital, Should Antiviral Chemoprophylaxis Be Administered to Exposed Residents/Patients?
Recommendation
53. Antiviral chemoprophylaxis should be administered as soon as possible to all exposed residents or patients who do not have suspected or laboratory-confirmed influenza regardless of influenza vaccination history, in addition to implementation of all other recommended influenza outbreak control measures, when an influenza outbreak has been identified in a long-term care facility or hospital (A-III).
During an Influenza Outbreak at a Long-term Care Facility, Should Antiviral Chemoprophylaxis Be Administered to Residents Only on Affected Units or to All Residents in the Facility?
Recommendation
54. Antiviral chemoprophylaxis should be administered to residents on outbreak-affected units, in addition to implementing active daily surveillance for new influenza cases throughout the facility (A-II).
Which Healthcare Personnel Should Receive Antiviral Chemoprophylaxis During an Institutional Outbreak?
Recommendations
55. Clinicians can consider antiviral chemoprophylaxis for unvaccinated staff, including those for whom chemoprophylaxis may be indicated based upon underlying conditions of the staff or their household members (see recommendations 41–43) for the duration of the outbreak (C-III).
56. Clinicians can consider antiviral chemoprophylaxis for staff who receive inactivated influenza vaccine during an institutional influenza outbreak for 14 days postvaccination (C-III).
57. Clinicians can consider antiviral chemoprophylaxis for staff regardless of influenza vaccination status to reduce the risk of short staffing in facilities and wards where clinical staff is limited and to reduce staff reluctance to care for patients with suspected influenza (C-III).
How Long Should Antiviral Chemoprophylaxis Be Given to Residents During an Influenza Outbreak in a Long-term Care Facility?
Recommendation
58. Clinicians should administer antiviral chemoprophylaxis for 14 days and continue for at least 7 days after the onset of symptoms in the last case identified during an institutional influenza outbreak (A-III).
References
Centers for Disease Control and Prevention.
Centers for Disease Control and Prevention.
Notes
Acknowledgments. The expert panel expresses its gratitude for thoughtful external reviews of an earlier version by Drs John Beigel, Arnold Monto, and Ruth Lynfield. The panel thanks Vita Washington and Rebecca Goldwater for their guidance and assistance in preparation of the manuscript; Peggy Cruse for her assistance with systematic literature searches; and Valery Lavergne for her guidance in formulating PICO questions and recommendations.
Disclaimer. While IDSA makes every effort to present accurate and reliable information, the information provided in these guidelines is “as is” without any warranty of accuracy, reliability, or otherwise, either express or implied. Neither IDSA nor its officers, directors, members, employees, or agents will be liable for any loss, damage, or claim with respect to any liabilities, including direct, special, indirect, or consequential damages, incurred in connection with these guidelines or reliance on the information presented. The findings and conclusions in this report are those of the authors and do not necessarily represent the official position of the CDC.
Financial support. Support for these guidelines was provided by the Infectious Diseases Society of America.
Potential conflicts of interest. The following list is a reflection of what has been reported to the IDSA. To provide thorough transparency, the IDSA requires full disclosure of all relationships, regardless of relevancy to the guideline topic. Evaluation of such relationships as potential conflicts of interest (COI) is determined by a review process that includes assessment by the Standards and Practice Guidelines Committee (SPGC) Chair, the SPGC liaison to the development panel and the Board of Directors (BOD) liaison to the SPGC, and if necessary, the COI Task Force of the BOD. This assessment of disclosed relationships for possible COI will be based on the relative weight of the financial relationship (ie, monetary amount) and the relevance of the relationship (ie, the degree to which an association might reasonably be interpreted by an independent observer as related to the topic or recommendation of consideration). The reader of these guidelines should be mindful of this when the list of disclosures is reviewed. H. H. B. reports grants from the New York State Department of Health and personal fees from Current Opinion in Pediatrics, Shire Human Genetic Therapies, the Harvard School of Public Health, and the American Academy of Pediatrics (AAP); H. H. B. is a member of the Advisory Committee on Immunization Practices at CDC; is an ex-officio member of the Committee on Infectious Diseases at AAP; and is an editor of the Red Book Online at AAP. J. A. E. reports personal fees from Sanofi Pasteur, Gilead, and the Bill & Melinda Gates Foundation and grants from Gilead, Chimerix, Novavax, the Bill & Melinda Gates Foundation, Alios/Janssen, and MedImmune, outside the submitted work. T. M. F. reports personal fees from bioMérieux, Curetis AG, GlaxoSmithKline, Melinta, Meji Seika Pharma Co, Merck & Co, MotifBio, Nabriva, Paratek, and Shionogi, during the conduct of the study. S. G. reports grants, personal fees, and nonfinancial support from Sanofi and Seqirus; personal fees from Merck, Pfizer, Longevoron, Janssen, GSK, and the Gerontological Society of America; and grants from the National Institutes of Health (NIH), CDC, and Janssen. F. G. H. reports personal fees from the World Health Organization and the University of Alabama Antiviral Drug Discovery and Development Consortium; other from Celltrion, GSK, Vaccitech, PRE Biopharm, and Seqirus; travel support and donations to a non-profit orphanage and school for consulting; and noncompensated consulting for various companies engaged in developing influenza therapeutics or vaccines (CoCrystal, Farmak, Genentech/Roche, GSK, Janssen, MedImmune, Medivector/FujiFilm, Regeneron, resTORbio, Vir, and Visterra). J. M. H. reports personal fees from Pfizer; nonfinancial support from Global Blood Therapeutics; and grants from the NIH, Fogarty International Center, the Health Resources and Services Administration, the Centers for Medicare and Medicaid, and the Maryland Institute of Emergency Medical System Services, outside the submitted work. M. G. I. reports grants from Janssen and Emergent BioSolutions; personal fees from Celltrion, Genentech/Roche, MediVector, Seqirus, VirBio, Alios, Biota, Crucell, Janssen, and NexBio, during the conduct of the study; and reimbursement for serving on a data safety monitoring board from GlaxoSmithKline. B. L. J. reports grants from Pfizer, Gilead, and the Canadian Institutes of Health Research (CIHR); and contracts for nosocomial infection surveillance from the Public Health Agency of Canada, outside the submitted work. A. M. reports grants and other from Crucell, Sanofi Pasteur, and GlaxoSmithKline; and grants from CIHR and the Ontario Workplace Safety Insurance Board, outside the submitted work. L. E. R. served as a consultant to the Vaccines and Medications in Pregnancy Surveillance System; served as a speaker for the American College of Obstetricians and Gynecologists; served as a contributor for UpToDate; served as a consultant to Johns Hopkins University; reports grants from the Bill & Melinda Gates Foundation; and provided expert testimony for Ficks and Connolly, for Wiggins and Dana, LLP, and for McAloon & Friedman. A. T. P. reports grants from the National Institute of Allergy and Infectious Diseases (NIAID)/NIH, NIAID/Biofire, and the CDC; other from Antimicrobial Therapy Inc; and personal fees from WebMD and Johnson & Johnson, outside the submitted work. All other authors report no potential conflicts of interest. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed.
Footnotes
These clinical practice guidelines are an update of the guidelines published by the Infectious Diseases Society of America (IDSA) in 2009, prior to the 2009 H1N1 influenza pandemic. This document addresses new information regarding diagnostic testing, treatment and chemoprophylaxis with antiviral medications, and issues related to institutional outbreak management for seasonal influenza. It is intended for use by primary care clinicians, obstetricians, emergency medicine providers, hospitalists, laboratorians, and infectious disease specialists, as well as other clinicians managing patients with suspected or laboratory-confirmed influenza. The guidelines consider the care of children and adults, including special populations such as pregnant and postpartum women and immunocompromised patients. It is important to realize that guidelines cannot always account for individual variation among patients. They are not intended to supplant physician judgment with respect to particular patients or special clinical situations. IDSA considers adherence to these guidelines to be voluntary, with the ultimate determination regarding their application to be made by the physician in the light of a patient’s individual circumstances.