Ensembl Resources Virtual Issue
Ensembl regulation resources
Daniel R. Zerbino, Nathan Johnson, Thomas Juetteman, Dan Sheppard, Steven P. Wilder, Ilias Lavidas, Michael Nuhn, Emily Perry, Quentin Raffaillac-Desfosses, Daniel Sobral, Damian Keefe, Stefan Gräf, Ikhlak Ahmed, Rhoda Kinsella, Bethan Pritchard, Simon Brent, Ridwan Amode, Anne Parker, Steven Trevanion, Ewan Birney, Ian Dunham and Paul Flicek
Database Vol. 2016, bav119 doi: 10.1093/database/bav119
Ensembl comparative genomics resources
Javier Herrero, Matthieu Muffato, Kathryn Beal, Stephen Fitzgerald, Leo Gordon, Miguel Pignatelli, Albert J. Vilella, Stephen M. J. Searle, Ridwan Amode, Simon Brent, William Spooner, Eugene Kulesha, Andrew Yates and Paul Flicek
Database Vol. 2016, bav096 doi: 10.1093/database/bav096
ncRNA orthologies in the vertebrate lineage
Miguel Pignatelli, Albert J. Vilella, Matthieu Muffato, Leo Gordon, Simon White, Paul Flicek and Javier Herrero
Database Vol. 2016, bav127 doi: 10.1093/database/bav127
The Ensembl gene annotation system
Bronwen L. Aken, Thibaut Hourlier, Kevin Howe, Andreas Kähäri, Fergal J. Martin, Daniel N. Murphy, Rishi Nag, Magali Ruffier, Michael Schuster, Y. Amy Tang, Jan-Hinnerk Vogel, Simon White, Amonida Zadissa, Paul Flicek, and Stephen M. J. Searle
Database Vol. 2016, baw093 doi: 10.1093/database/baw093
Ensembl Core Software Resources: storage and programmatic access for DNA sequence and genome annotation
Magali Ruffier, Andreas Kähäri, Monika Komorowska, Stephen Keenan, Matthew Laird, Ian Longdon, Glenn Proctor, Stephen Searle, Daniel Staines, Kieron Taylor, Alessandro Vullo, Andrew Yates, Daniel Zerbino, Paul Flicek
Database Vol. 2017, bax020 doi: 10.1093/database/bax020
GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species
Richard J. Challis, Sujai Kumar, Lewis Stevens, and Mark Blaxter
Database Vol. 2017, bax039 doi: 10.1093/database/bax039
Ensembl variation resources
Sarah E Hunt, William McLaren, Laurent Gil, Anja Thormann, Helen Schuilenburg, Dan Sheppard, Andrew Parton, Irina M Armean, Stephen J Trevanion, Paul Flicek, and Fiona Cunningham
Database Vol. 2018, bay119 doi: 10.1093/database/bay119
