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Microbes vs Metals

Lucian C Staicu and John F Stolz
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Metals play a key role in our daily lives and affect everything from healthcare to industrialisation and our culture. Covering topics including metal resistance, biomineralization, sulfate remediation, synthetic biology, bacterial bioremediation, biorecycling, microbial adaptation, and fungal diversity, the articles in this collection demonstrate the unique and complex relationship between microbes and metals. 

Editorial

Editorial: microbes vs. metals: harvest and recycle
Lucian C Staicu and John F Stolz
FEMS Microbiology Ecology, Volume 97, Issue 5, May 2021, fiab056, https://doi.org/10.1093/femsec/fiab056
Microbes and metals are intricately linked in a complex relationship. Many microbial pathways rely on metals for functionality, including enzymatic machinery (co-factors in key enzymes), dissimilatory reduction in energy generation (as alternative electron acceptors in anaerobic respiration) and ...

Perspective

Got Selenium?
Ronald S Oremland
FEMS Microbiology Ecology, Volume 96, Issue 6, June 2020, fiaa094, https://doi.org/10.1093/femsec/fiaa094
A personal retrospective on my research on the microbiology of the element selenium.

Mini Reviews

Synthetic biology approaches to copper remediation: bioleaching, accumulation and recycling
Andrea Giachino and others
FEMS Microbiology Ecology, Volume 97, Issue 2, February 2021, fiaa249, https://doi.org/10.1093/femsec/fiaa249
A review of current technologies in bacterial bioremediation, biorecycling and bioleaching, of copper homeostasis strategies used by bacteria, and how these could be exploited through synthetic biology for bioremediation.
Cupriavidus metallidurans CH34, a historical perspective on its discovery, characterization and metal resistance
Max Mergeay and Rob Van Houdt
FEMS Microbiology Ecology, Volume 97, Issue 2, February 2021, fiaa247, https://doi.org/10.1093/femsec/fiaa247
This minireview describes the isolation, early research and legacy tools used to study Cupriavidus metallidurans CH34, a model organism for bacterial metal resistance.
Microbial selenium metabolism: a brief history, biogeochemistry and ecophysiology
Michael Wells and John F Stolz
FEMS Microbiology Ecology, Volume 96, Issue 12, December 2020, fiaa209, https://doi.org/10.1093/femsec/fiaa209
This review provides an historical overview of research on selenium in microbiology, its biogeochemical cycle, and the organisms and their metabolisms that mediate key transformations, including oxidation/reduction and methylation.

Research Articles

An arsRB resistance operon confers tolerance to arsenite in the environmental isolate Terribacillus sp. AE2B 122
Almudena Escobar-Niño and others
FEMS Microbiology Ecology, Volume 97, Issue 3, March 2021, fiab015, https://doi.org/10.1093/femsec/fiab015
Terribacillus harbors an unusual ars operon that confers resistance to arsenite in Escherichia coli.
Transcriptomics analysis of the metabolic mechanisms of iron reduction induced by sulfate reduction mediated by sulfate-reducing bacteria
Guo-Xiang Li and Peng Bao
FEMS Microbiology Ecology, Volume 97, Issue 3, March 2021, fiab005, https://doi.org/10.1093/femsec/fiab005
Sulfate promotes the enzymatic (via c-type cytochromes) and abiotic (via sulfide) iron reduction by sulfate-reducing bacteria.
Limited carbon sources prevent sulfate remediation in circumneutral abandoned mine drainage
Michelle M Valkanas and others
FEMS Microbiology Ecology, Volume 97, Issue 2, February 2021, fiaa262, https://doi.org/10.1093/femsec/fiaa262
Sulfur cycling in passive remediation systems that precipitate heavy metals out of coal mine drainage requires both biotic and abiotic processes and actively growing microbes.
Introducing a “core steel microbiome” and community functional analysis associated with microbially influenced corrosion
Cody E Garrison and Erin K Field
FEMS Microbiology Ecology, Volume 97, Issue 1, January 2021, fiaa237, https://doi.org/10.1093/femsec/fiaa237
Heterotrophic generalist microbes comprised a core microbiome within steel microbial communities that were functionally but not phylogenetically conserved across salinity.
Identification of a TeO32− reductase/mycothione reductase from Rhodococcus erythropolis PR4
Zachary J Butz and others
FEMS Microbiology Ecology, Volume 97, Issue 1, January 2021, fiaa220, https://doi.org/10.1093/femsec/fiaa220
A novel enzyme selective for tellurium reduction was isolated from an environmental sample and characterized.
Microbial adaptation in vertical soil profiles contaminated by an antimony smelting plant
Rui Xu and others
FEMS Microbiology Ecology, Volume 96, Issue 11, November 2020, fiaa188, https://doi.org/10.1093/femsec/fiaa188
Results indicated that microbial adaptation changed in response to different levels of contamination throughout the soil profiles, which were distinct from the control profile.
Microbiomes in a manganese oxide producing ecosystem in the Ytterby mine, Sweden: impact on metal mobility
Susanne Sjöberg and others
FEMS Microbiology Ecology, Volume 96, Issue 11, November 2020, fiaa169, https://doi.org/10.1093/femsec/fiaa169
Defining the spatial distribution of microorganisms and elements in this REE-enriched Mn-oxide producing ecosystem contribute to a better understanding of specific niches and parameters driving the emergence of these communities.
Bacterial and fungal diversity in the lorandite (TlAsS2) mine ‘Allchar' in the Republic of North Macedonia
Vaso Taleski and others
FEMS Microbiology Ecology, Volume 96, Issue 9, September 2020, fiaa155, https://doi.org/10.1093/femsec/fiaa155
This study identifies newly described As- and Tl-tolerant bacteria and fungi with potential for use in bioremediation strategies.
PbS biomineralization using cysteine: Bacillus cereus and the sulfur rush
Lucian C Staicu and others
FEMS Microbiology Ecology, Volume 96, Issue 9, September 2020, fiaa151, https://doi.org/10.1093/femsec/fiaa151
This article describes a novel strategy employed by bacteria to reduce the toxicity of lead by forming a mineral with limited solubility.
NAD(P)H-dependent thioredoxin-disulfide reductase TrxR is essential for tellurite and selenite reduction and resistance in Bacillus sp. Y3
Muhammad Yasir and others
FEMS Microbiology Ecology, Volume 96, Issue 9, September 2020, fiaa126, https://doi.org/10.1093/femsec/fiaa126
Bacillussp. Y3 can efficiently reduce Se(IV) and Te(IV) via a mechanism involving TrxR.
A genomic perspective of metal-resistant bacteria from gold particles: Possible survival mechanisms during gold biogeochemical cycling
Santonu Kumar Sanyal and others
FEMS Microbiology Ecology, Volume 96, Issue 7, July 2020, fiaa111, https://doi.org/10.1093/femsec/fiaa111
Bacteria living on gold particles have physiological and genomic capacities to ensure survival during Au biogeochemical cycling.
Metal-induced bacterial interactions promote diversity in river-sediment microbiomes
Valentine Cyriaque and others
FEMS Microbiology Ecology, Volume 96, Issue 6, June 2020, fiaa076, https://doi.org/10.1093/femsec/fiaa076
Metal impacts on sediment-associated microbial community assembly.
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