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Microscopy Revolution

Tâm Mignot, Marcelo Nollmann
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Microbiology research has been hugely affected by new advances in imaging techniques. This Thematic Issue explores how these advances are helping to further our understanding of the microbial world around us. The articles in this collection cover a range of topics including RNA imaging in bacteria, bacterial translesion synthesis, stress responses, and super-resolution imaging of pathogens.  

Editorial

Biology across scales: from atomic processes to bacterial communities through the lens of the microscope
Tâm Mignot and Marcelo Nollmann
FEMS Microbiology Reviews, Volume 45, Issue 5, September 2021, fuab009, https://doi.org/10.1093/femsre/fuab009
In the past, bacteria have been often viewed as an archetypal unicellular model, where single cells behave independently and autonomously. However, bacterial communities have been recently recognized as multicellular organisms able to display emerging collective properties and spatial organization. ...

Reviews

Advances and opportunities in image analysis of bacterial cells and communities
Hannah Jeckel and Knut Drescher
FEMS Microbiology Reviews, Volume 45, Issue 4, July 2021, fuaa062, https://doi.org/10.1093/femsre/fuaa062
Advances in computational image analysis result in new opportunities for the analysis of spatiotemporal processes in bacterial cells and communities, and perhaps in the near for artificial intelligence-based automated adaptive microscopy in microbiology.
RNA imaging in bacteria
Sara Rombouts and Marcelo Nollmann
FEMS Microbiology Reviews, Volume 45, Issue 2, March 2021, fuaa051, https://doi.org/10.1093/femsre/fuaa051
Recent advances in RNA labeling make it possible to study transcript abundance, localization and dynamics in bacteria.
Bacterial cell proliferation: from molecules to cells
Alix Meunier and others
FEMS Microbiology Reviews, Volume 45, Issue 1, January 2021, fuaa046, https://doi.org/10.1093/femsre/fuaa046
Newly characterized simple principles that describe how bacterial cells grow and divide at the cellular scale need to be related with the underlying complex and interwoven molecular mechanisms.
Super-resolution imaging of bacterial pathogens and visualization of their secreted effectors
Moirangthem Kiran Singh and Linda J Kenney
FEMS Microbiology Reviews, Volume 45, Issue 2, March 2021, fuaa050, https://doi.org/10.1093/femsre/fuaa050
This review focuses on how recent advances in super-resolution imaging have been applied to studies of bacterial pathogens.
Direct visualisation of drug-efflux in live Escherichia coli cells
Audrey Reuter and others
FEMS Microbiology Reviews, Volume 44, Issue 6, November 2020, Pages 782–792, https://doi.org/10.1093/femsre/fuaa031
Real-time visualization of tetracycline (Tc) and the Tc-specific TetA efflux pump protein reveals the dynamics of drug accumulation and extrusion in live Escherichia coli cells.
Prospects for antimicrobial development in the cryo-EM era – a focus on the ribosome
Alba Herrero del Valle and C Axel Innis
FEMS Microbiology Reviews, Volume 44, Issue 6, November 2020, Pages 793–803, https://doi.org/10.1093/femsre/fuaa032
Recent developments in cryo-electron microscopy point to a key role for this technique in future efforts to develop antimicrobial drugs that target the ribosome.
Visualizing mutagenic repair: novel insights into bacterial translesion synthesis
Asha Mary Joseph and Anjana Badrinarayanan
FEMS Microbiology Reviews, Volume 44, Issue 5, September 2020, Pages 572–582, https://doi.org/10.1093/femsre/fuaa023
In this review we highlight the application of microscopy-based approaches to unravel the in vivo mechanism and regulation of bacterial translesion synthesis.
Pulses and delays, anticipation and memory: seeing bacterial stress responses from a single-cell perspective
Valentine Lagage and Stephan Uphoff
FEMS Microbiology Reviews, Volume 44, Issue 5, September 2020, Pages 565–571, https://doi.org/10.1093/femsre/fuaa022
This review highlights microscopy approaches that visualise dynamics and heterogeneity of stress responses at single-cell resolution.
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