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Best Paper Awards

Lisa Stein, Josh Neufeld, Thulani Makhalanyane, and Jillian Petersen.

As the Editor-in-Chief team for The ISME Journal, we are committed to promoting excellence in all aspects of our flagship society journal. We strive to ensure rapid handling of manuscripts and quality reviews as we seek to publish the most important discoveries in microbial ecology.

As part of this philosophy, we wish to acknowledge and celebrate the most impactful articles in our journal. We use a diverse complement of article metrics related to citations, social media mentions, blog posts, and page accesses to shortlist articles that may be deserving of special recognition for a given year. Following this process, we evaluate articles for their content to help reach our final decisions.

High impact articles elevate the profile of our journal and highlight exceptional discoveries in the field of microbial ecology and, given the number of major advances that we publish each year, it is particularly difficult to only select three.

For the 2024 Best Paper Awards, we Editors-in-Chief would like to recognize the following three articles for their outstanding quality and impact. We think you will agree that these three articles nicely reflect the breadth of topics that The ISME Journal publishes each year from authors around the world.

2024

Xiaolong Wang and others
The ISME Journal, Volume 18, Issue 1, January 2024, wrad032, https://doi.org/10.1093/ismejo/wrad032
Antimicrobial resistance is a major threat for public health. Plasmids play a critical role in the spread of antimicrobial resistance via horizontal gene transfer between bacterial species. However, it remains unclear how plasmids originally recruit and assemble various antibiotic resistance genes (ARGs). Here, we track ARG recruitment and assembly in clinically relevant plasmids by combining a systematic analysis of 2420 complete plasmid genomes and experimental validation. 
Brittany N Zepernick and others
The ISME Journal, Volume 18, Issue 1, January 2024, wrad015, https://doi.org/10.1093/ismejo/wrad015
The rediscovery of diatom blooms embedded within and beneath the Lake Erie ice cover (2007–2012) ignited interest in psychrophilic adaptations and winter limnology. Subsequent studies determined the vital role ice plays in winter diatom ecophysiology as diatoms partition to the underside of ice, thereby fixing their location within the photic zone. Yet, climate change has led to widespread ice decline across the Great Lakes, with Lake Erie presenting a nearly “ice-free” state in several recent winters.
Jan-Samuel Puls and others
The ISME Journal, Volume 18, Issue 1, January 2024, wrae044, https://doi.org/10.1093/ismejo/wrae044
Many bacteria produce antimicrobial compounds such as lantibiotics to gain advantage in the competitive natural environments of microbiomes. Epilancins constitute an until now underexplored family of lantibiotics with an unknown ecological role and unresolved mode of action. We discovered production of an epilancin in the nasal isolate Staphylococcus epidermidis A37. 

Previous Best Paper Awards

2023

  1. Life history strategies among soil bacteria—dichotomy for few, continuum for many
  2. Plant microbiomes harbor potential to promote nutrient turnover in impoverished substrates of a Brazilian biodiversity hotspot
  3. Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean

2022

  1. Organochlorine contamination enriches virus-encoded metabolism and pesticide degradation associated auxiliary genes in soil microbiomes
  2. Forest tree growth is linked to mycorrhizal fungal composition and function across Europe
  3. Ecological memory of prior nutrient exposure in the human gut microbiome

2021

  1. Evolutionary stasis of a deep subsurface microbial lineage
  2. Artificial sweeteners stimulate horizontal transfer of extracellular antibiotic resistance genes through natural transformation
  3. Fungal phytopathogen modulates plant and insect responses to promote its dissemination

2020

  1. Intra-colony channels in E. coli function as a nutrient uptake system
  2. It does not always take two to tango: “Syntrophy” via hydrogen cycling in one bacterial cell
  3. Phage-specific metabolic reprogramming of virocell

Outstanding Editorial Board Member Awards

The Editors-in-Chief wish to extend their congratulations to the following top three outstanding Editorial Board members, for their consistent hard work in offering a high number of quality reviews in a timely manner in 2024:

  • Rolf Kuemmerli
  • Tess Brewer
  • Hans Berstein

Each receives an open access waiver for their next article and a one-year membership to ISME.

Previous Outstanding Editorial Board Member Awards

2023

  • Meiying Xu
  • Linda Thomashow
  • William Orsi

2022

  • Trinity Hamilton
  • David Johnson
  • Mamoru Oshiki

2021

  • Willm Martens-Habbena
  • Stavros Veresoglou
  • Joy Buongiorno

2020

  • Graeme Nicol
  • Steven Siciliano
  • Amy Pruden
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