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Nicolas Desroche, Déborah De Oliveira, Anne-Flore Imhaus, Mario Hupfeld, Lars Fieseler, Validation of N-Light™ Salmonella Risk Test Kit for Detection of Salmonella spp. on Environmental Surfaces: AOAC Performance Tested MethodSM 072204, Journal of AOAC INTERNATIONAL, Volume 106, Issue 4, July-August 2023, Pages 939–948, https://doi.org/10.1093/jaoacint/qsad017
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Abstract
The NEMIS N-Light™ Salmonella Risk method uses chemiluminescence designed for the qualitative detection of Salmonella spp. from environmental surface samples.
To validate the N-Light Salmonella Risk assay using independent and method developer validation studies according to the AOAC Performance Tested MethodsSM (PTM) program for the detection of Salmonella spp. on stainless-steel, polystyrene, and ceramic environmental surfaces.
The N-Light Salmonella Risk assay was evaluated in a matrix study in comparison to the ISO 6579-1:2017 method (“Microbiology of the Food Chain—Horizontal Method for the Detection, Enumeration, and Serotyping of Salmonella—Part 1: Detection of Salmonella spp.”) using an unpaired study design. Additional PTM studies performed were inclusivity/exclusivity, robustness, product consistency, and stability.
The N-Light Salmonella Risk assay demonstrated a specific detection of all Salmonella strains tested. In the matrix study, the N-Light Salmonella Risk assay showed no significant differences between presumptive and confirmed results or between candidate and reference method results on the three surfaces evaluated. Data for additional PTM studies met acceptance criteria requirements.
The NEMIS Technologies N-Light Salmonella Risk assay is an effective method for the qualitative detection of Salmonella on stainless-steel, polystyrene, and ceramic environmental surfaces.
The NEMIS Technologies N-Light Salmonella Risk assay, which is the first chemiluminescence-based detection system that uses a novel, patented dioxetane compound, allowing for easy and rapid detection of Salmonella.
General Information
Salmonella belong to the Enterobacteriaceae family and are generally motile, non-spore-forming, rod-shaped, Gram-negative bacteria. They are separated into two species, Salmonella bongori and Salmonella enterica. The nontyphoid Salmonella can cause salmonellosis, an infection of the gastrointestinal tract, in animals and humans. Salmonella have been isolated from productive livestock such as poultry, bovines, ovines, or swine and also from different wild animals, including deer, wild birds, and reptiles. The bacteria are usually fecal-orally transmitted to humans via contaminated food or drinking water (1).
Principle of the Method
The N-Light™ Salmonella assay is a qualitative test to rapidly detect Salmonella spp. in food processing areas and on equipment in environmental monitoring programs. The assay uses a patented ultrasensitive chemiluminescent dioxetane molecule (AquaSpark®) as a probe, which is cleaved by an esterase uniformly expressed in Salmonella. N-Light Salmonella uses a proprietary selective culture enrichment technology, which consists of a unique enrichment broth amended with antibiotics and a bacteriophage cocktail targeting Gram-negative competitor species.
Following surface sampling according to ISO 18593:2017, a swab is transferred into the enrichment broth, a biosafety cap that permanently seals the tube closed. Then the tube is incubated for 24 ± 2 h in a dry heating block at 37 ± 1°C. For detection of chemiluminescence after Salmonella enrichment, an AquaSpark and a lysis tablet are first simultaneously released into the enrichment broth from the biosafety cap without further sample preparation. The tube is vortexed 15 s for efficient bacterial lysis and dissolution of both tablets and incubated at 37 ± 2°C for 3 min. Subsequently, chemiluminescence is quantified using a NEMIS luminometer. A sample is considered presumptively positive if the determined relative light units (RLU) exceed a specific threshold.
Scope of Method
Analyte.—Salmonella spp.
Matrixes.—Stainless-steel (AISI 304, grade 2b finish), polystyrene, and ceramic (glazed earthen) 1″ × 1″ test areas.
Summary of validated performance claims.—The N-Light Salmonella assay demonstrated no statistical difference in performance to the reference method ISO 6579-1:2017 “Microbiology of the Food Chain—Horizontal Method for the Detection, Enumeration, and Serotyping of Salmonella—Part 1” (2) for the detection of Salmonella spp. on environmental surfaces (stainless steel, polystyrene, and ceramic) after 24 h of enrichment.
Definitions
Probability of detection (POD).—The proportion of positive analytical outcomes for a qualitative method for a given matrix at a given analyte level or concentration. POD is concentration dependent. Several POD measures can be calculated; PODR (reference method POD), PODC (confirmed candidate method POD), PODCP (candidate method presumptive result POD), and PODCC (candidate method confirmation result POD).
Difference of probabilities of detection (dPOD).—Difference of probabilities of detection is the difference between any two POD values. If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level (3).
Materials and Methods
Test Kit Information
Kit name.—N-Light Salmonella Risk.
Test Kit Components
NEMIS Salmonella Enrichment Broth.—50 tubes containing 2 mL enrichment.
Selective supplement tablets and dispenser.
Flocked swabs.
Buffer water peptone solution (BPW).
Additional Supplies and Reagents
None.
Apparatus
Dry heating block.—Capable of maintaining 37 ± 2°C.
Vortex mixer.
NEMIS Technologies BTL1 luminometer.
Serological pipet or micropipet.—For sampling and delivering of 1–10 mL.
Refrigerator.—Capable of maintaining 2–8°C.
Cultures
American Type Culture Collection (ATCC).—Manassas, VA, USA.
Collection de l’Institut Pasteur (CIP).—Paris, France.
Culture Collection University of Gothenburg (CCUG).—Goteborg, Sweden.
Deutsche Sammlung von Mikroorganismen und Zellkulturen (DSMZ).—Braunschweig, Germany.
Animal Plant Health Agency (APHA).—Addlestone, United Kingdom.
NEMIS Technology Microbial Strain Collection (NEMIS).—Dübendorf, Switzerland.
Zürcher Hochschule für Angewandte Wissenschaften (ZHAW).—Wädenswil, Switzerland.
Robert Koch Institute (RKI and FS).—Berlin, Germany.
Nexidia Microbial Strain Collection (NEXIDIA).—Dijon, France.
Safety Precautions
The following general precautions should always be followed. Clean the workstations with the disinfectant of choice (e.g., sodium hypochlorite solution, phenol solution, quaternary ammonium solution) before and after use as part of aseptic techniques. In addition to cleaning workstations, working areas should be separated for the following: media preparation, sample preparation, and pathogen detection. Gloves and other personal protective equipment should be used at all times. The NEMIS Technologies BTL1 luminometer or supplies should never be touched without wearing gloves. Never reuse kit disposables, and always change pipets and pipet tips between samples.
The NEMIS Technologies N-Light Salmonella Risk assay should be disposed of following procedures for infectious or potentially infectious products. The user should wear appropriate personal protective equipment, including (but not limited to) protective disposable gloves, laboratory coats, and eye protection, when handling samples and kit reagents. Wash hands thoroughly after handling specimens and reagents. It is the responsibility of each laboratory to handle waste and effluents produced according to their type and degree of hazardousness and to treat and dispose them (or have them treated and disposed) in accordance with local, state, and federal regulations. Strict compliance with BSL-2 practices should be followed (3).
Salmonella is a Biosafety Level 2 organism. Biological samples such as enrichments have the potential to transmit infectious diseases. Follow all applicable local, state/provincial, and national regulations on disposal of biological wastes. Wear appropriate protective equipment, which includes but is not limited to protective eyewear, face shield, clothing/lab coat, and gloves. All work should be conducted in properly equipped facilities using the appropriate safety equipment (for example, physical containment devices). Individuals should be trained in accordance with applicable regulatory and company/institution requirements before working with potentially infectious materials. All enrichment broths should be sterilized following confirmation.
General Preparation
Use aseptic technique.
Change pipet tips between samples.
Do not reuse kit disposables.
Clean workstations before and after use.
Separate work areas for media preparation, sample preparation, and pathogen detection.
Sample Preparation
Surface areas (stainless steel, polystyrene, and ceramic) of 1″ × 1″ in size were sampled with a swab premoistened with BPW prior to sampling. After sampling, the swab is placed into a tube containing 2 mL of NEMIS Salmonella enrichment broth and the N-Light Salmonella Risk specific antibiotic tablet was dispensed into the tube. Afterwards, the tube is shaken vigorously using a vortex mixer for 15 s. The tube is closed using the cap containing the AquaSpark and Lysis tablet and then incubated at 37 ± 1°C for 24 ± 2 h in a dry heating block.
Analysis
N-Light method
Remove tubes from the dry heat incubator.
Press the button on the dispenser cap to release the AquaSpark and Lysis tablet into the enrichment tube and vortex for 15 s.
Incubate in a dry heating block for 3 min at 37 ± 2°C.
Read tube in the luminometer and obtain results.
Instrument loading
Open the lid to the instrument.
Load the sample tube into the instrument.
Close the lid of the instrument.
Press Start Run to initiate the run.
Sample analysis takes 10 s, and results are displayed automatically.
When the run is completed, open the lid of the luminometer and remove the sample tube.
Data analysis and interpreting results
Viewing results.—
Results are displayed after sample analysis.
Sample analysis takes 10 s, and results are displayed automatically.
Interpretation.—
0 RLU ≤ Result < 20 000 RLU—negative sample.
20 000 RLU ≤ Result < 50 000 RLU—“Yellow-Critical” presumptive positive.
Result > 50 000 RLU—“Red-Alert” presumptive positive.
Confirmation
The N-Light Salmonella Risk assay test portions can be confirmed following the ISO 6579-1:2017 reference method for the detection of Salmonella or, alternatively, by streaking the samples onto Xylose Lysine Deoxycholate (XLD) and Brilliance™ Salmonella Agar (BSA) and incubating at 37 ± 1°C for 24 ± 3 h (2).
Validation Study
The N-Light Salmonella Risk assay was conducted under the AOAC Research Institute Performance Tested MethodSM (PTM) program and the AOAC INTERNATIONAL Methods Committee Guidelines for Validation of Microbiological Methods for Food and Environmental Surfaces, Appendix J (4). The PTM validation has two main parts: method developer studies and independent laboratory validation studies.
Method developer studies were conducted in the laboratories of Nexidia SAS and included the inclusivity/exclusivity study of the target microorganism (Salmonella), matrix studies for all claimed matrixes (stainless steel, polystyrene, and ceramic), product consistency, stability studies, and robustness testing.
The independent laboratory study was conducted by Q-Laboratories (Cincinnati, OH) and included the matrix study for detection of Salmonella on a stainless-steel surface. The reference method for the matrix study was the ISO 6579-1:2017 “Microbiology of the Food Chain—Horizontal Method for the Detection, Enumeration and Serotyping of Salmonella—Part 1: Detection of Salmonella spp.”
Results
Method Developer Studies
Methods.—The inclusivity/exclusivity study examined the ability of the N-Light Salmonella Risk method to detect a variety of the claimed target strains (Salmonella spp.) and to distinguish those strains from closely related nontarget strains and species. One hundred and twenty-one inclusivity strains, covering the two species (S. bongori and S. enterica) and the six subspecies S. enterica subsp. Enterica (several serovars), S. enterica subsp. Salamae, S. enterica subsp. Arizonae, S. enterica subsp. Diarizonae, S. enterica subsp. Houtenae, and S. enterica subsp. Indica., were cultured in NEMIS SalM enrichment media for 24 ± 1 h at 37 ± 1°C. After incubation, the strains were tested without dilution. One replicate per strain was tested.
Exclusivity strains included 32 different non-Salmonella strains, including other Enterobacteriaceae species strains (Shigella sp., Enterobacter sp., Citrobacter sp., Escherichia sp., Klebsiella sp., Hafnia sp., Pantoea sp., Proteus sp., and Cronobacter sp.). Exclusivity strains were cultivated in nonselective media, Tryptic Soy Broth (TSB), or MRS broth depending on bacterial species at conditions for optimal growth. Exclusivity cultures were not diluted prior to analysis.
Inclusivity and exclusivity cultures were blind-coded and randomized so that the analyst did not know the identity of the test samples. For each strain, codes have been randomly generated by software (Excel). Labels with the code were manually applied to each tube by Experimenter 1. Experimenter 2 conducted the N-Light Salmonella Risk test on the blind-coded samples. AquaSpark and lysis tablets were released from the caps to the suspension. Tubes were then mixed by vortex for 10 s. After 3 min of incubation at 37°C (dry heating block), luminescence was measured in the NEMIS luminometer (BTL1, NEMIS). Results were decoded and tabulated by strain.
Results.—Of the 121 specific inclusivity strains tested, 121 were detected by the N-Light method (Table 1). Of the 32 specific exclusivity strains tested, 32 were not detected by the N-Light method (Table 2). OD600nm measurement of each suspension before the N-Light test confirmed that all strains have grown (data not shown). The results are shown in Table 1 and Table 2.
No. . | Species . | Subspecies . | Serovars . | Antigenic formula/Serogroup . | Source . | Reference . | Origin . | Results . |
---|---|---|---|---|---|---|---|---|
1 | S. bongori | - | – | 66: z41:- | DSMZa | 13772 | Human | Positive |
2 | S. bongori | - | – | 48: z35 : - | ZHAWb | N268-08 | Environmental | Positive |
3 | S. bongori | - | – | – | CCUGc | 63587 | Human feces | Positive |
4 | S. enterica | arizonae | – | – | CCUG | 29867 | Human feces | Positive |
5 | S. enterica | arizonae | – | – | CCUG | 63588 | Human feces | Positive |
6 | S. enterica | arizonae | – | 44: z4, z23:- | APHAd | S00902-21 | Reptile | Positive |
7 | S. enterica | diarizonae | – | 61: c: z35 | ZHAW | N09-2338 | Human feces | Positive |
8 | S. enterica | diarizonae | – | 50: z52: z35 | CCUG | 30388 | Snake | Positive |
9 | S. enterica | diarizonae | – | S.III 50:5:1,5,7 | Nexidiae | NEX-1902 | Dehydrated food product | Positive |
10 | S. enterica | diarizonae | APHA | L00996-15 | Chicken | Positive | ||
11 | S. enterica | diarizonae | – | 50: z: z52 | APHA | S00991-1 | Reptile | Positive |
12 | S. enterica | houtenae | – | 38: z4, z23 : - | ZHAW | N09-2589 | Snake | Positive |
13 | S. enterica | houtenae | – | 43: z4, z23 : - | ZHAW | N20-1583 | Human feces | Positive |
14 | S. enterica | houtenae | – | 50: z4, z23:- | CCUG | 30393 | Snake | Positive |
15 | S. enterica | houtenae | – | 43: z4, z23 | CCUG | 30415 | Snake | Positive |
16 | S. enterica | indica | APHA | L01098-19 | Chicken | Positive | ||
17 | S. enterica | indica | – | VI 1,6 ,1 4: a : 1,5 | IPf | 359–82 | Food | Positive |
18 | S. enterica | indica | – | VI 16: z10:1,5 | IP | 959/71 | Human | Positive |
19 | S. enterica | salamae | 30: l, z28: z6 | ZHAW | N09-2794 | Human feces | Positive | |
20 | S. enterica | salamae | Tranoroa | 1,9,12,46,27: a: z6 | CIP | 106895 | Lizard | Positive |
21 | S. enterica | salamae | Tranoroa | II 55: k: z39 | Nexidia | NEX-1258 | Food isolate | Positive |
22 | S. enterica | enterica | Abaetetuba | F | Nexidia | NEX-1716 | Dairy product | Positive |
23 | S. enterica | enterica | Adelaide | O | ZHAW | N19-976 | Human feces | Positive |
24 | S. enterica | enterica | Adelaide | O | Nexidia | NEX-785 | Food isolate | Positive |
25 | S. enterica | enterica | Agona | B | Nexidia | NEX-1639 | Calf sweetbreads | Positive |
26 | S. enterica | enterica | Albany | C3 | ZHAW | N18-1907 | Feed | Positive |
27 | S. enterica | enterica | Albany | C3 | ZHAW | N20-2523 | Food poultry | Positive |
28 | S. enterica | enterica | Amsterdam | E1 | Nexidia | NEX-1767 | Food isolate | Positive |
29 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1723 | Rapeseed sample | Positive |
30 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1724 | Canula | Positive |
31 | S. enterica | enterica | Aschersleben | N | Nexidia | NEX-1906 | Food isolate | Positive |
32 | S. enterica | enterica | Bergen | X | Nexidia | NEX-1644 | Food isolate | Positive |
33 | S. enterica | enterica | Berta | D1 | ZHAW | N19-2653 | Human feces | Positive |
34 | S. enterica | enterica | Bijlmer | R | ZHAW | N15-2159 | Human feces | Positive |
35 | S. enterica | enterica | Blockley | C2 | Nexidia | NEX-1574 | Food enrichment | Positive |
36 | S. enterica | enterica | Blockley | C2 | ZHAW | N18-1544 | Human feces | Positive |
37 | S. enterica | enterica | Braenderup | C1 | Nexidia | NEX-1850 | Milk | Positive |
38 | S. enterica | enterica | Brandenburg | B | Nexidia | NEX-1786 | Cheese | Positive |
39 | S. enterica | enterica | Bredeney | B | Nexidia | NEX-1464 | Food product | Positive |
40 | S. enterica | enterica | Caracas | H | Nexidia | NEX-1785 | Food product | Positive |
41 | S. enterica | enterica | Carmel | J | ZHAW | N17-0762 | Chicken | Positive |
42 | S. enterica | enterica | Cerro | K | Nexidia | NEX-1657 | Chick fluff | Positive |
43 | S. enterica | enterica | Champaign | Q | Nexidia | NEX-1576 | Food isolate | Positive |
44 | S. enterica | enterica | Chandans | F | Nexidia | NEX-1664 | Food product | Positive |
45 | S. enterica | enterica | Chester | B | Nexidia | NEX-862 | Duck liver | Positive |
46 | S. enterica | enterica | Coeln | B | Nexidia | NEX-1106 | Food isolate | Positive |
47 | S. enterica | enterica | Corvallis | C2 | ZHAW | N20-0386 | Human feces | Positive |
48 | S. enterica | enterica | Corvallis | C2 | Nexidia | NEX-1066 | Food isolate | Positive |
49 | S. enterica | enterica | Cubana | G | Nexidia | NEX-1829 | Food isolate | Positive |
50 | S. enterica | enterica | Derby | B | Nexidia | NEX-700 | Seafood products | Positive |
51 | S. enterica | enterica | Dublin | 9: g, p:- | CIPg | 110276 | Bovine | Positive |
52 | S. enterica | enterica | Ealing | O | Nexidia | NEX-1667 | Food isolate | Positive |
53 | S. enterica | enterica | Emek | C3 | ZHAW | N19-0283 | Human feces | Positive |
54 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1787 | Cheese | Positive |
55 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1794 | Milk | Positive |
56 | S. enterica | enterica | Fresno | D2 | ZHAW | N17-1724 | Human feces | Positive |
57 | S. enterica | enterica | Gateshead | D2 | ZHAW | N19-1826 | Human feces | Positive |
58 | S. enterica | enterica | Give | E | Nexidia | NEX-1609 | Food isolate | Positive |
59 | S. enterica | enterica | Hadar | C3 | ZHAW | N10-0099 | Human feces | Positive |
60 | S. enterica | enterica | Havana | G | Nexidia | NEX-1152 | Feed product | Positive |
61 | S. enterica | enterica | Heidelberg | B | Nexidia | NEX-1704 | Poultry | Positive |
62 | S. enterica | enterica | Hofit | Q | ZHAW | N18-1113 | Human feces | Positive |
63 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1151 | Food enrichment | Positive |
64 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1467 | Food isolate | Positive |
65 | S. enterica | enterica | Indiana | B | Nexidia | NEX-1402 | Food product | Positive |
66 | S. enterica | enterica | Infantis | C1 | Nexidia | NEX-814 | Meat | Positive |
67 | S. enterica | enterica | Javiana | D1 | ZHAW | N1246-08 | Human feces | Positive |
68 | S. enterica | enterica | Johannesburg | R | ZHAW | N17-1932 | Human feces | Positive |
69 | S. enterica | enterica | Kasenyi | P | ZHAW | N20-0227 | Food | Positive |
70 | S. enterica | enterica | Kedougou | G2 | Nexidia | NEX-1111 | Tuna | Positive |
71 | S. enterica | enterica | Kentucky | C3 | Nexidia | NEX-1617 | Food isolate | Positive |
72 | S. enterica | enterica | Korovi | P | ZHAW | N16-0899 | Feed | Positive |
73 | S. enterica | enterica | Kottbus | C2 | Nexidia | NEX-1471 | Food isolate | Positive |
74 | S. enterica | enterica | Lagos | B | Nexidia | NEX-703 | Meat | Positive |
75 | S. enterica | enterica | Lille | C1 | Nexidia | NEX-296 | Food isolate | Positive |
76 | S. enterica | enterica | Litchfield | C2 | ZHAW | N18-1222 | Human feces | Positive |
77 | S. enterica | enterica | Livingstone | C1 | Nexidia | NEX-1645 | Food isolate | Positive |
78 | S. enterica | enterica | London | E1 | Nexidia | NEX-1666 | Food enrichment | Positive |
79 | S. enterica | enterica | Manchester | C2 | Nexidia | NEX-1658 | Food isolate | Positive |
80 | S. enterica | enterica | Manhattan | C3 | Nexidia | NEX-1560 | Food isolate | Positive |
81 | S. enterica | enterica | Mbandaka | C1 | ZHAW | N18-1863 | Human feces | Positive |
82 | S. enterica | enterica | Meleagridis | E1 | Nexidia | NEX-742 | Ground beef | Positive |
83 | S. enterica | enterica | Menston | C1 | ZHAW | N18-1184 | Human feces | Positive |
84 | S. enterica | enterica | Minnesota | L | ZHAW | N20-2630 | Food poultry | Positive |
85 | S. enterica | enterica | Mississippi | G | Nexidia | NEX-1764 | Food isolate | Positive |
86 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1025 | Cheese | Positive |
87 | S. enterica | enterica | Montevideo | C1 | CIP | 104583 | Monkey | Positive |
88 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1775 | Food isolate | Positive |
89 | S. enterica | enterica | Muenchen | C2 | Nexidia | NEX-1326 | Food isolate | Positive |
90 | S. enterica | enterica | Muenster | E1 | ZHAW | N520-08 | Human feces | Positive |
91 | S. enterica | enterica | Napoli | D1 | Nexidia | NEX-1863 | Food isolate | Positive |
92 | S. enterica | enterica | Newport | C2 | Nexidia | NEX-816 | Meat | Positive |
93 | S. enterica | enterica | Nima | M | Nexidia | NEX-1881 | Food isolate | Positive |
94 | S. enterica | enterica | Oranienburg | C1 | Nexidia | NEX-1725 | Rapeseed | Positive |
95 | S. enterica | enterica | Orion | E1 | Nexidia | NEX-1776 | Food isolate | Positive |
96 | S. enterica | enterica | Ouakam | D2 | Nexidia | NEX-837 | Food isolate | Positive |
97 | S. enterica | enterica | Panama | D1 | Nexidia | NEX-740 | Horse steak | Positive |
98 | S. enterica | enterica | Plymouth | D2 | ZHAW | N20-0792 | Human feces | Positive |
99 | S. enterica | enterica | Poona | G | ZHAW | N19-29 | Human feces | Positive |
100 | S. enterica | enterica | Ramatgan | N | Nexidia | NEX-311 | Food isolate | Positive |
101 | S. enterica | enterica | Reading | B | Nexidia | NEX-919 | Water | Positive |
102 | S. enterica | enterica | Regent | E1 | Nexidia | NEX-1555 | Food isolate | Positive |
103 | S. enterica | enterica | Rissen | C1 | Nexidia | NEX-1191 | Food isolate | Positive |
104 | S. enterica | enterica | Saintpaul | B | Nexidia | NEX-1389 | Food enrichment | Positive |
105 | S. enterica | enterica | Sandiego | B | ZHAW | N19-1171 | Human feces | Positive |
106 | S. enterica | enterica | Schwarzengrund | B | Nexidia | NEX-1571 | Food enrichment | Positive |
107 | S. enterica | enterica | Senftenberg | E4 | ZHAW | N2313-08 | Human feces | Positive |
108 | S. enterica | enterica | Stuivenberg | E4 | Nexidia | NEX-702 | Meat | Positive |
109 | S. enterica | enterica | Tennessee | C1 | Nexidia | NEX-1185 | Food isolate | Positive |
110 | S. enterica | enterica | Thompson | C1 | Nexidia | NEX-1569 | Food product | Positive |
111 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1640 | Fish meal | Positive |
112 | S. enterica | enterica | Typhimurium | B | ATCC | 14028 | Clinical | Positive |
113 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1742 | Cheese | Positive |
114 | S. enterica | enterica | Umbilo | M | Nexidia | NEX-1413 | Food isolate | Positive |
115 | S. enterica | enterica | Veneziana | F | Nexidia | NEX-780 | Food isolate | Positive |
116 | S. enterica | enterica | Virchow | C1 | Nexidia | NEX-1454 | Food product | Positive |
117 | S. enterica | enterica | Virginia | C3 | ZHAW | N18-1861 | Human feces | Positive |
118 | S. enterica | enterica | Wandsworth | Q | ZHAW | N13-0958 | Human feces | Positive |
119 | S. enterica | enterica | Worthington | G | Nexidia | NEX-1880 | Food isolate | Positive |
120 | S. enterica | enterica | S.I | 1, 4, [5], 12:-:-nonmotile | Nexidia | NEX-998 | Goose viscera | Positive |
121 | S. enterica | enterica | S.I | I 4, [5], 12: i:- | Nexidia | NEX-1360 | Food enrichment | Positive |
No. . | Species . | Subspecies . | Serovars . | Antigenic formula/Serogroup . | Source . | Reference . | Origin . | Results . |
---|---|---|---|---|---|---|---|---|
1 | S. bongori | - | – | 66: z41:- | DSMZa | 13772 | Human | Positive |
2 | S. bongori | - | – | 48: z35 : - | ZHAWb | N268-08 | Environmental | Positive |
3 | S. bongori | - | – | – | CCUGc | 63587 | Human feces | Positive |
4 | S. enterica | arizonae | – | – | CCUG | 29867 | Human feces | Positive |
5 | S. enterica | arizonae | – | – | CCUG | 63588 | Human feces | Positive |
6 | S. enterica | arizonae | – | 44: z4, z23:- | APHAd | S00902-21 | Reptile | Positive |
7 | S. enterica | diarizonae | – | 61: c: z35 | ZHAW | N09-2338 | Human feces | Positive |
8 | S. enterica | diarizonae | – | 50: z52: z35 | CCUG | 30388 | Snake | Positive |
9 | S. enterica | diarizonae | – | S.III 50:5:1,5,7 | Nexidiae | NEX-1902 | Dehydrated food product | Positive |
10 | S. enterica | diarizonae | APHA | L00996-15 | Chicken | Positive | ||
11 | S. enterica | diarizonae | – | 50: z: z52 | APHA | S00991-1 | Reptile | Positive |
12 | S. enterica | houtenae | – | 38: z4, z23 : - | ZHAW | N09-2589 | Snake | Positive |
13 | S. enterica | houtenae | – | 43: z4, z23 : - | ZHAW | N20-1583 | Human feces | Positive |
14 | S. enterica | houtenae | – | 50: z4, z23:- | CCUG | 30393 | Snake | Positive |
15 | S. enterica | houtenae | – | 43: z4, z23 | CCUG | 30415 | Snake | Positive |
16 | S. enterica | indica | APHA | L01098-19 | Chicken | Positive | ||
17 | S. enterica | indica | – | VI 1,6 ,1 4: a : 1,5 | IPf | 359–82 | Food | Positive |
18 | S. enterica | indica | – | VI 16: z10:1,5 | IP | 959/71 | Human | Positive |
19 | S. enterica | salamae | 30: l, z28: z6 | ZHAW | N09-2794 | Human feces | Positive | |
20 | S. enterica | salamae | Tranoroa | 1,9,12,46,27: a: z6 | CIP | 106895 | Lizard | Positive |
21 | S. enterica | salamae | Tranoroa | II 55: k: z39 | Nexidia | NEX-1258 | Food isolate | Positive |
22 | S. enterica | enterica | Abaetetuba | F | Nexidia | NEX-1716 | Dairy product | Positive |
23 | S. enterica | enterica | Adelaide | O | ZHAW | N19-976 | Human feces | Positive |
24 | S. enterica | enterica | Adelaide | O | Nexidia | NEX-785 | Food isolate | Positive |
25 | S. enterica | enterica | Agona | B | Nexidia | NEX-1639 | Calf sweetbreads | Positive |
26 | S. enterica | enterica | Albany | C3 | ZHAW | N18-1907 | Feed | Positive |
27 | S. enterica | enterica | Albany | C3 | ZHAW | N20-2523 | Food poultry | Positive |
28 | S. enterica | enterica | Amsterdam | E1 | Nexidia | NEX-1767 | Food isolate | Positive |
29 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1723 | Rapeseed sample | Positive |
30 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1724 | Canula | Positive |
31 | S. enterica | enterica | Aschersleben | N | Nexidia | NEX-1906 | Food isolate | Positive |
32 | S. enterica | enterica | Bergen | X | Nexidia | NEX-1644 | Food isolate | Positive |
33 | S. enterica | enterica | Berta | D1 | ZHAW | N19-2653 | Human feces | Positive |
34 | S. enterica | enterica | Bijlmer | R | ZHAW | N15-2159 | Human feces | Positive |
35 | S. enterica | enterica | Blockley | C2 | Nexidia | NEX-1574 | Food enrichment | Positive |
36 | S. enterica | enterica | Blockley | C2 | ZHAW | N18-1544 | Human feces | Positive |
37 | S. enterica | enterica | Braenderup | C1 | Nexidia | NEX-1850 | Milk | Positive |
38 | S. enterica | enterica | Brandenburg | B | Nexidia | NEX-1786 | Cheese | Positive |
39 | S. enterica | enterica | Bredeney | B | Nexidia | NEX-1464 | Food product | Positive |
40 | S. enterica | enterica | Caracas | H | Nexidia | NEX-1785 | Food product | Positive |
41 | S. enterica | enterica | Carmel | J | ZHAW | N17-0762 | Chicken | Positive |
42 | S. enterica | enterica | Cerro | K | Nexidia | NEX-1657 | Chick fluff | Positive |
43 | S. enterica | enterica | Champaign | Q | Nexidia | NEX-1576 | Food isolate | Positive |
44 | S. enterica | enterica | Chandans | F | Nexidia | NEX-1664 | Food product | Positive |
45 | S. enterica | enterica | Chester | B | Nexidia | NEX-862 | Duck liver | Positive |
46 | S. enterica | enterica | Coeln | B | Nexidia | NEX-1106 | Food isolate | Positive |
47 | S. enterica | enterica | Corvallis | C2 | ZHAW | N20-0386 | Human feces | Positive |
48 | S. enterica | enterica | Corvallis | C2 | Nexidia | NEX-1066 | Food isolate | Positive |
49 | S. enterica | enterica | Cubana | G | Nexidia | NEX-1829 | Food isolate | Positive |
50 | S. enterica | enterica | Derby | B | Nexidia | NEX-700 | Seafood products | Positive |
51 | S. enterica | enterica | Dublin | 9: g, p:- | CIPg | 110276 | Bovine | Positive |
52 | S. enterica | enterica | Ealing | O | Nexidia | NEX-1667 | Food isolate | Positive |
53 | S. enterica | enterica | Emek | C3 | ZHAW | N19-0283 | Human feces | Positive |
54 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1787 | Cheese | Positive |
55 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1794 | Milk | Positive |
56 | S. enterica | enterica | Fresno | D2 | ZHAW | N17-1724 | Human feces | Positive |
57 | S. enterica | enterica | Gateshead | D2 | ZHAW | N19-1826 | Human feces | Positive |
58 | S. enterica | enterica | Give | E | Nexidia | NEX-1609 | Food isolate | Positive |
59 | S. enterica | enterica | Hadar | C3 | ZHAW | N10-0099 | Human feces | Positive |
60 | S. enterica | enterica | Havana | G | Nexidia | NEX-1152 | Feed product | Positive |
61 | S. enterica | enterica | Heidelberg | B | Nexidia | NEX-1704 | Poultry | Positive |
62 | S. enterica | enterica | Hofit | Q | ZHAW | N18-1113 | Human feces | Positive |
63 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1151 | Food enrichment | Positive |
64 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1467 | Food isolate | Positive |
65 | S. enterica | enterica | Indiana | B | Nexidia | NEX-1402 | Food product | Positive |
66 | S. enterica | enterica | Infantis | C1 | Nexidia | NEX-814 | Meat | Positive |
67 | S. enterica | enterica | Javiana | D1 | ZHAW | N1246-08 | Human feces | Positive |
68 | S. enterica | enterica | Johannesburg | R | ZHAW | N17-1932 | Human feces | Positive |
69 | S. enterica | enterica | Kasenyi | P | ZHAW | N20-0227 | Food | Positive |
70 | S. enterica | enterica | Kedougou | G2 | Nexidia | NEX-1111 | Tuna | Positive |
71 | S. enterica | enterica | Kentucky | C3 | Nexidia | NEX-1617 | Food isolate | Positive |
72 | S. enterica | enterica | Korovi | P | ZHAW | N16-0899 | Feed | Positive |
73 | S. enterica | enterica | Kottbus | C2 | Nexidia | NEX-1471 | Food isolate | Positive |
74 | S. enterica | enterica | Lagos | B | Nexidia | NEX-703 | Meat | Positive |
75 | S. enterica | enterica | Lille | C1 | Nexidia | NEX-296 | Food isolate | Positive |
76 | S. enterica | enterica | Litchfield | C2 | ZHAW | N18-1222 | Human feces | Positive |
77 | S. enterica | enterica | Livingstone | C1 | Nexidia | NEX-1645 | Food isolate | Positive |
78 | S. enterica | enterica | London | E1 | Nexidia | NEX-1666 | Food enrichment | Positive |
79 | S. enterica | enterica | Manchester | C2 | Nexidia | NEX-1658 | Food isolate | Positive |
80 | S. enterica | enterica | Manhattan | C3 | Nexidia | NEX-1560 | Food isolate | Positive |
81 | S. enterica | enterica | Mbandaka | C1 | ZHAW | N18-1863 | Human feces | Positive |
82 | S. enterica | enterica | Meleagridis | E1 | Nexidia | NEX-742 | Ground beef | Positive |
83 | S. enterica | enterica | Menston | C1 | ZHAW | N18-1184 | Human feces | Positive |
84 | S. enterica | enterica | Minnesota | L | ZHAW | N20-2630 | Food poultry | Positive |
85 | S. enterica | enterica | Mississippi | G | Nexidia | NEX-1764 | Food isolate | Positive |
86 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1025 | Cheese | Positive |
87 | S. enterica | enterica | Montevideo | C1 | CIP | 104583 | Monkey | Positive |
88 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1775 | Food isolate | Positive |
89 | S. enterica | enterica | Muenchen | C2 | Nexidia | NEX-1326 | Food isolate | Positive |
90 | S. enterica | enterica | Muenster | E1 | ZHAW | N520-08 | Human feces | Positive |
91 | S. enterica | enterica | Napoli | D1 | Nexidia | NEX-1863 | Food isolate | Positive |
92 | S. enterica | enterica | Newport | C2 | Nexidia | NEX-816 | Meat | Positive |
93 | S. enterica | enterica | Nima | M | Nexidia | NEX-1881 | Food isolate | Positive |
94 | S. enterica | enterica | Oranienburg | C1 | Nexidia | NEX-1725 | Rapeseed | Positive |
95 | S. enterica | enterica | Orion | E1 | Nexidia | NEX-1776 | Food isolate | Positive |
96 | S. enterica | enterica | Ouakam | D2 | Nexidia | NEX-837 | Food isolate | Positive |
97 | S. enterica | enterica | Panama | D1 | Nexidia | NEX-740 | Horse steak | Positive |
98 | S. enterica | enterica | Plymouth | D2 | ZHAW | N20-0792 | Human feces | Positive |
99 | S. enterica | enterica | Poona | G | ZHAW | N19-29 | Human feces | Positive |
100 | S. enterica | enterica | Ramatgan | N | Nexidia | NEX-311 | Food isolate | Positive |
101 | S. enterica | enterica | Reading | B | Nexidia | NEX-919 | Water | Positive |
102 | S. enterica | enterica | Regent | E1 | Nexidia | NEX-1555 | Food isolate | Positive |
103 | S. enterica | enterica | Rissen | C1 | Nexidia | NEX-1191 | Food isolate | Positive |
104 | S. enterica | enterica | Saintpaul | B | Nexidia | NEX-1389 | Food enrichment | Positive |
105 | S. enterica | enterica | Sandiego | B | ZHAW | N19-1171 | Human feces | Positive |
106 | S. enterica | enterica | Schwarzengrund | B | Nexidia | NEX-1571 | Food enrichment | Positive |
107 | S. enterica | enterica | Senftenberg | E4 | ZHAW | N2313-08 | Human feces | Positive |
108 | S. enterica | enterica | Stuivenberg | E4 | Nexidia | NEX-702 | Meat | Positive |
109 | S. enterica | enterica | Tennessee | C1 | Nexidia | NEX-1185 | Food isolate | Positive |
110 | S. enterica | enterica | Thompson | C1 | Nexidia | NEX-1569 | Food product | Positive |
111 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1640 | Fish meal | Positive |
112 | S. enterica | enterica | Typhimurium | B | ATCC | 14028 | Clinical | Positive |
113 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1742 | Cheese | Positive |
114 | S. enterica | enterica | Umbilo | M | Nexidia | NEX-1413 | Food isolate | Positive |
115 | S. enterica | enterica | Veneziana | F | Nexidia | NEX-780 | Food isolate | Positive |
116 | S. enterica | enterica | Virchow | C1 | Nexidia | NEX-1454 | Food product | Positive |
117 | S. enterica | enterica | Virginia | C3 | ZHAW | N18-1861 | Human feces | Positive |
118 | S. enterica | enterica | Wandsworth | Q | ZHAW | N13-0958 | Human feces | Positive |
119 | S. enterica | enterica | Worthington | G | Nexidia | NEX-1880 | Food isolate | Positive |
120 | S. enterica | enterica | S.I | 1, 4, [5], 12:-:-nonmotile | Nexidia | NEX-998 | Goose viscera | Positive |
121 | S. enterica | enterica | S.I | I 4, [5], 12: i:- | Nexidia | NEX-1360 | Food enrichment | Positive |
DSMZ = Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany.
ZHAW = Zürcher Hochschule für Angewandte Wissenschaften, Wädenswil, Switzerland.
CCUG = Culture Collection University of Gothenburg, Goteborg, Sweden.
APHA = Animal Plant Health Agency, Addlestone, United Kingdom.
Nexidia = Nexidia Microbial Strain Collection, Dijon, France.
IP = Institut Pasteur, Paris, France.
CIP = Collection de l’Institut Pasteur, Paris, France.
No. . | Species . | Subspecies . | Serovars . | Antigenic formula/Serogroup . | Source . | Reference . | Origin . | Results . |
---|---|---|---|---|---|---|---|---|
1 | S. bongori | - | – | 66: z41:- | DSMZa | 13772 | Human | Positive |
2 | S. bongori | - | – | 48: z35 : - | ZHAWb | N268-08 | Environmental | Positive |
3 | S. bongori | - | – | – | CCUGc | 63587 | Human feces | Positive |
4 | S. enterica | arizonae | – | – | CCUG | 29867 | Human feces | Positive |
5 | S. enterica | arizonae | – | – | CCUG | 63588 | Human feces | Positive |
6 | S. enterica | arizonae | – | 44: z4, z23:- | APHAd | S00902-21 | Reptile | Positive |
7 | S. enterica | diarizonae | – | 61: c: z35 | ZHAW | N09-2338 | Human feces | Positive |
8 | S. enterica | diarizonae | – | 50: z52: z35 | CCUG | 30388 | Snake | Positive |
9 | S. enterica | diarizonae | – | S.III 50:5:1,5,7 | Nexidiae | NEX-1902 | Dehydrated food product | Positive |
10 | S. enterica | diarizonae | APHA | L00996-15 | Chicken | Positive | ||
11 | S. enterica | diarizonae | – | 50: z: z52 | APHA | S00991-1 | Reptile | Positive |
12 | S. enterica | houtenae | – | 38: z4, z23 : - | ZHAW | N09-2589 | Snake | Positive |
13 | S. enterica | houtenae | – | 43: z4, z23 : - | ZHAW | N20-1583 | Human feces | Positive |
14 | S. enterica | houtenae | – | 50: z4, z23:- | CCUG | 30393 | Snake | Positive |
15 | S. enterica | houtenae | – | 43: z4, z23 | CCUG | 30415 | Snake | Positive |
16 | S. enterica | indica | APHA | L01098-19 | Chicken | Positive | ||
17 | S. enterica | indica | – | VI 1,6 ,1 4: a : 1,5 | IPf | 359–82 | Food | Positive |
18 | S. enterica | indica | – | VI 16: z10:1,5 | IP | 959/71 | Human | Positive |
19 | S. enterica | salamae | 30: l, z28: z6 | ZHAW | N09-2794 | Human feces | Positive | |
20 | S. enterica | salamae | Tranoroa | 1,9,12,46,27: a: z6 | CIP | 106895 | Lizard | Positive |
21 | S. enterica | salamae | Tranoroa | II 55: k: z39 | Nexidia | NEX-1258 | Food isolate | Positive |
22 | S. enterica | enterica | Abaetetuba | F | Nexidia | NEX-1716 | Dairy product | Positive |
23 | S. enterica | enterica | Adelaide | O | ZHAW | N19-976 | Human feces | Positive |
24 | S. enterica | enterica | Adelaide | O | Nexidia | NEX-785 | Food isolate | Positive |
25 | S. enterica | enterica | Agona | B | Nexidia | NEX-1639 | Calf sweetbreads | Positive |
26 | S. enterica | enterica | Albany | C3 | ZHAW | N18-1907 | Feed | Positive |
27 | S. enterica | enterica | Albany | C3 | ZHAW | N20-2523 | Food poultry | Positive |
28 | S. enterica | enterica | Amsterdam | E1 | Nexidia | NEX-1767 | Food isolate | Positive |
29 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1723 | Rapeseed sample | Positive |
30 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1724 | Canula | Positive |
31 | S. enterica | enterica | Aschersleben | N | Nexidia | NEX-1906 | Food isolate | Positive |
32 | S. enterica | enterica | Bergen | X | Nexidia | NEX-1644 | Food isolate | Positive |
33 | S. enterica | enterica | Berta | D1 | ZHAW | N19-2653 | Human feces | Positive |
34 | S. enterica | enterica | Bijlmer | R | ZHAW | N15-2159 | Human feces | Positive |
35 | S. enterica | enterica | Blockley | C2 | Nexidia | NEX-1574 | Food enrichment | Positive |
36 | S. enterica | enterica | Blockley | C2 | ZHAW | N18-1544 | Human feces | Positive |
37 | S. enterica | enterica | Braenderup | C1 | Nexidia | NEX-1850 | Milk | Positive |
38 | S. enterica | enterica | Brandenburg | B | Nexidia | NEX-1786 | Cheese | Positive |
39 | S. enterica | enterica | Bredeney | B | Nexidia | NEX-1464 | Food product | Positive |
40 | S. enterica | enterica | Caracas | H | Nexidia | NEX-1785 | Food product | Positive |
41 | S. enterica | enterica | Carmel | J | ZHAW | N17-0762 | Chicken | Positive |
42 | S. enterica | enterica | Cerro | K | Nexidia | NEX-1657 | Chick fluff | Positive |
43 | S. enterica | enterica | Champaign | Q | Nexidia | NEX-1576 | Food isolate | Positive |
44 | S. enterica | enterica | Chandans | F | Nexidia | NEX-1664 | Food product | Positive |
45 | S. enterica | enterica | Chester | B | Nexidia | NEX-862 | Duck liver | Positive |
46 | S. enterica | enterica | Coeln | B | Nexidia | NEX-1106 | Food isolate | Positive |
47 | S. enterica | enterica | Corvallis | C2 | ZHAW | N20-0386 | Human feces | Positive |
48 | S. enterica | enterica | Corvallis | C2 | Nexidia | NEX-1066 | Food isolate | Positive |
49 | S. enterica | enterica | Cubana | G | Nexidia | NEX-1829 | Food isolate | Positive |
50 | S. enterica | enterica | Derby | B | Nexidia | NEX-700 | Seafood products | Positive |
51 | S. enterica | enterica | Dublin | 9: g, p:- | CIPg | 110276 | Bovine | Positive |
52 | S. enterica | enterica | Ealing | O | Nexidia | NEX-1667 | Food isolate | Positive |
53 | S. enterica | enterica | Emek | C3 | ZHAW | N19-0283 | Human feces | Positive |
54 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1787 | Cheese | Positive |
55 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1794 | Milk | Positive |
56 | S. enterica | enterica | Fresno | D2 | ZHAW | N17-1724 | Human feces | Positive |
57 | S. enterica | enterica | Gateshead | D2 | ZHAW | N19-1826 | Human feces | Positive |
58 | S. enterica | enterica | Give | E | Nexidia | NEX-1609 | Food isolate | Positive |
59 | S. enterica | enterica | Hadar | C3 | ZHAW | N10-0099 | Human feces | Positive |
60 | S. enterica | enterica | Havana | G | Nexidia | NEX-1152 | Feed product | Positive |
61 | S. enterica | enterica | Heidelberg | B | Nexidia | NEX-1704 | Poultry | Positive |
62 | S. enterica | enterica | Hofit | Q | ZHAW | N18-1113 | Human feces | Positive |
63 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1151 | Food enrichment | Positive |
64 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1467 | Food isolate | Positive |
65 | S. enterica | enterica | Indiana | B | Nexidia | NEX-1402 | Food product | Positive |
66 | S. enterica | enterica | Infantis | C1 | Nexidia | NEX-814 | Meat | Positive |
67 | S. enterica | enterica | Javiana | D1 | ZHAW | N1246-08 | Human feces | Positive |
68 | S. enterica | enterica | Johannesburg | R | ZHAW | N17-1932 | Human feces | Positive |
69 | S. enterica | enterica | Kasenyi | P | ZHAW | N20-0227 | Food | Positive |
70 | S. enterica | enterica | Kedougou | G2 | Nexidia | NEX-1111 | Tuna | Positive |
71 | S. enterica | enterica | Kentucky | C3 | Nexidia | NEX-1617 | Food isolate | Positive |
72 | S. enterica | enterica | Korovi | P | ZHAW | N16-0899 | Feed | Positive |
73 | S. enterica | enterica | Kottbus | C2 | Nexidia | NEX-1471 | Food isolate | Positive |
74 | S. enterica | enterica | Lagos | B | Nexidia | NEX-703 | Meat | Positive |
75 | S. enterica | enterica | Lille | C1 | Nexidia | NEX-296 | Food isolate | Positive |
76 | S. enterica | enterica | Litchfield | C2 | ZHAW | N18-1222 | Human feces | Positive |
77 | S. enterica | enterica | Livingstone | C1 | Nexidia | NEX-1645 | Food isolate | Positive |
78 | S. enterica | enterica | London | E1 | Nexidia | NEX-1666 | Food enrichment | Positive |
79 | S. enterica | enterica | Manchester | C2 | Nexidia | NEX-1658 | Food isolate | Positive |
80 | S. enterica | enterica | Manhattan | C3 | Nexidia | NEX-1560 | Food isolate | Positive |
81 | S. enterica | enterica | Mbandaka | C1 | ZHAW | N18-1863 | Human feces | Positive |
82 | S. enterica | enterica | Meleagridis | E1 | Nexidia | NEX-742 | Ground beef | Positive |
83 | S. enterica | enterica | Menston | C1 | ZHAW | N18-1184 | Human feces | Positive |
84 | S. enterica | enterica | Minnesota | L | ZHAW | N20-2630 | Food poultry | Positive |
85 | S. enterica | enterica | Mississippi | G | Nexidia | NEX-1764 | Food isolate | Positive |
86 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1025 | Cheese | Positive |
87 | S. enterica | enterica | Montevideo | C1 | CIP | 104583 | Monkey | Positive |
88 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1775 | Food isolate | Positive |
89 | S. enterica | enterica | Muenchen | C2 | Nexidia | NEX-1326 | Food isolate | Positive |
90 | S. enterica | enterica | Muenster | E1 | ZHAW | N520-08 | Human feces | Positive |
91 | S. enterica | enterica | Napoli | D1 | Nexidia | NEX-1863 | Food isolate | Positive |
92 | S. enterica | enterica | Newport | C2 | Nexidia | NEX-816 | Meat | Positive |
93 | S. enterica | enterica | Nima | M | Nexidia | NEX-1881 | Food isolate | Positive |
94 | S. enterica | enterica | Oranienburg | C1 | Nexidia | NEX-1725 | Rapeseed | Positive |
95 | S. enterica | enterica | Orion | E1 | Nexidia | NEX-1776 | Food isolate | Positive |
96 | S. enterica | enterica | Ouakam | D2 | Nexidia | NEX-837 | Food isolate | Positive |
97 | S. enterica | enterica | Panama | D1 | Nexidia | NEX-740 | Horse steak | Positive |
98 | S. enterica | enterica | Plymouth | D2 | ZHAW | N20-0792 | Human feces | Positive |
99 | S. enterica | enterica | Poona | G | ZHAW | N19-29 | Human feces | Positive |
100 | S. enterica | enterica | Ramatgan | N | Nexidia | NEX-311 | Food isolate | Positive |
101 | S. enterica | enterica | Reading | B | Nexidia | NEX-919 | Water | Positive |
102 | S. enterica | enterica | Regent | E1 | Nexidia | NEX-1555 | Food isolate | Positive |
103 | S. enterica | enterica | Rissen | C1 | Nexidia | NEX-1191 | Food isolate | Positive |
104 | S. enterica | enterica | Saintpaul | B | Nexidia | NEX-1389 | Food enrichment | Positive |
105 | S. enterica | enterica | Sandiego | B | ZHAW | N19-1171 | Human feces | Positive |
106 | S. enterica | enterica | Schwarzengrund | B | Nexidia | NEX-1571 | Food enrichment | Positive |
107 | S. enterica | enterica | Senftenberg | E4 | ZHAW | N2313-08 | Human feces | Positive |
108 | S. enterica | enterica | Stuivenberg | E4 | Nexidia | NEX-702 | Meat | Positive |
109 | S. enterica | enterica | Tennessee | C1 | Nexidia | NEX-1185 | Food isolate | Positive |
110 | S. enterica | enterica | Thompson | C1 | Nexidia | NEX-1569 | Food product | Positive |
111 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1640 | Fish meal | Positive |
112 | S. enterica | enterica | Typhimurium | B | ATCC | 14028 | Clinical | Positive |
113 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1742 | Cheese | Positive |
114 | S. enterica | enterica | Umbilo | M | Nexidia | NEX-1413 | Food isolate | Positive |
115 | S. enterica | enterica | Veneziana | F | Nexidia | NEX-780 | Food isolate | Positive |
116 | S. enterica | enterica | Virchow | C1 | Nexidia | NEX-1454 | Food product | Positive |
117 | S. enterica | enterica | Virginia | C3 | ZHAW | N18-1861 | Human feces | Positive |
118 | S. enterica | enterica | Wandsworth | Q | ZHAW | N13-0958 | Human feces | Positive |
119 | S. enterica | enterica | Worthington | G | Nexidia | NEX-1880 | Food isolate | Positive |
120 | S. enterica | enterica | S.I | 1, 4, [5], 12:-:-nonmotile | Nexidia | NEX-998 | Goose viscera | Positive |
121 | S. enterica | enterica | S.I | I 4, [5], 12: i:- | Nexidia | NEX-1360 | Food enrichment | Positive |
No. . | Species . | Subspecies . | Serovars . | Antigenic formula/Serogroup . | Source . | Reference . | Origin . | Results . |
---|---|---|---|---|---|---|---|---|
1 | S. bongori | - | – | 66: z41:- | DSMZa | 13772 | Human | Positive |
2 | S. bongori | - | – | 48: z35 : - | ZHAWb | N268-08 | Environmental | Positive |
3 | S. bongori | - | – | – | CCUGc | 63587 | Human feces | Positive |
4 | S. enterica | arizonae | – | – | CCUG | 29867 | Human feces | Positive |
5 | S. enterica | arizonae | – | – | CCUG | 63588 | Human feces | Positive |
6 | S. enterica | arizonae | – | 44: z4, z23:- | APHAd | S00902-21 | Reptile | Positive |
7 | S. enterica | diarizonae | – | 61: c: z35 | ZHAW | N09-2338 | Human feces | Positive |
8 | S. enterica | diarizonae | – | 50: z52: z35 | CCUG | 30388 | Snake | Positive |
9 | S. enterica | diarizonae | – | S.III 50:5:1,5,7 | Nexidiae | NEX-1902 | Dehydrated food product | Positive |
10 | S. enterica | diarizonae | APHA | L00996-15 | Chicken | Positive | ||
11 | S. enterica | diarizonae | – | 50: z: z52 | APHA | S00991-1 | Reptile | Positive |
12 | S. enterica | houtenae | – | 38: z4, z23 : - | ZHAW | N09-2589 | Snake | Positive |
13 | S. enterica | houtenae | – | 43: z4, z23 : - | ZHAW | N20-1583 | Human feces | Positive |
14 | S. enterica | houtenae | – | 50: z4, z23:- | CCUG | 30393 | Snake | Positive |
15 | S. enterica | houtenae | – | 43: z4, z23 | CCUG | 30415 | Snake | Positive |
16 | S. enterica | indica | APHA | L01098-19 | Chicken | Positive | ||
17 | S. enterica | indica | – | VI 1,6 ,1 4: a : 1,5 | IPf | 359–82 | Food | Positive |
18 | S. enterica | indica | – | VI 16: z10:1,5 | IP | 959/71 | Human | Positive |
19 | S. enterica | salamae | 30: l, z28: z6 | ZHAW | N09-2794 | Human feces | Positive | |
20 | S. enterica | salamae | Tranoroa | 1,9,12,46,27: a: z6 | CIP | 106895 | Lizard | Positive |
21 | S. enterica | salamae | Tranoroa | II 55: k: z39 | Nexidia | NEX-1258 | Food isolate | Positive |
22 | S. enterica | enterica | Abaetetuba | F | Nexidia | NEX-1716 | Dairy product | Positive |
23 | S. enterica | enterica | Adelaide | O | ZHAW | N19-976 | Human feces | Positive |
24 | S. enterica | enterica | Adelaide | O | Nexidia | NEX-785 | Food isolate | Positive |
25 | S. enterica | enterica | Agona | B | Nexidia | NEX-1639 | Calf sweetbreads | Positive |
26 | S. enterica | enterica | Albany | C3 | ZHAW | N18-1907 | Feed | Positive |
27 | S. enterica | enterica | Albany | C3 | ZHAW | N20-2523 | Food poultry | Positive |
28 | S. enterica | enterica | Amsterdam | E1 | Nexidia | NEX-1767 | Food isolate | Positive |
29 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1723 | Rapeseed sample | Positive |
30 | S. enterica | enterica | Anatum | E1 | Nexidia | NEX-1724 | Canula | Positive |
31 | S. enterica | enterica | Aschersleben | N | Nexidia | NEX-1906 | Food isolate | Positive |
32 | S. enterica | enterica | Bergen | X | Nexidia | NEX-1644 | Food isolate | Positive |
33 | S. enterica | enterica | Berta | D1 | ZHAW | N19-2653 | Human feces | Positive |
34 | S. enterica | enterica | Bijlmer | R | ZHAW | N15-2159 | Human feces | Positive |
35 | S. enterica | enterica | Blockley | C2 | Nexidia | NEX-1574 | Food enrichment | Positive |
36 | S. enterica | enterica | Blockley | C2 | ZHAW | N18-1544 | Human feces | Positive |
37 | S. enterica | enterica | Braenderup | C1 | Nexidia | NEX-1850 | Milk | Positive |
38 | S. enterica | enterica | Brandenburg | B | Nexidia | NEX-1786 | Cheese | Positive |
39 | S. enterica | enterica | Bredeney | B | Nexidia | NEX-1464 | Food product | Positive |
40 | S. enterica | enterica | Caracas | H | Nexidia | NEX-1785 | Food product | Positive |
41 | S. enterica | enterica | Carmel | J | ZHAW | N17-0762 | Chicken | Positive |
42 | S. enterica | enterica | Cerro | K | Nexidia | NEX-1657 | Chick fluff | Positive |
43 | S. enterica | enterica | Champaign | Q | Nexidia | NEX-1576 | Food isolate | Positive |
44 | S. enterica | enterica | Chandans | F | Nexidia | NEX-1664 | Food product | Positive |
45 | S. enterica | enterica | Chester | B | Nexidia | NEX-862 | Duck liver | Positive |
46 | S. enterica | enterica | Coeln | B | Nexidia | NEX-1106 | Food isolate | Positive |
47 | S. enterica | enterica | Corvallis | C2 | ZHAW | N20-0386 | Human feces | Positive |
48 | S. enterica | enterica | Corvallis | C2 | Nexidia | NEX-1066 | Food isolate | Positive |
49 | S. enterica | enterica | Cubana | G | Nexidia | NEX-1829 | Food isolate | Positive |
50 | S. enterica | enterica | Derby | B | Nexidia | NEX-700 | Seafood products | Positive |
51 | S. enterica | enterica | Dublin | 9: g, p:- | CIPg | 110276 | Bovine | Positive |
52 | S. enterica | enterica | Ealing | O | Nexidia | NEX-1667 | Food isolate | Positive |
53 | S. enterica | enterica | Emek | C3 | ZHAW | N19-0283 | Human feces | Positive |
54 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1787 | Cheese | Positive |
55 | S. enterica | enterica | Enteritidis | D1 | Nexidia | NEX-1794 | Milk | Positive |
56 | S. enterica | enterica | Fresno | D2 | ZHAW | N17-1724 | Human feces | Positive |
57 | S. enterica | enterica | Gateshead | D2 | ZHAW | N19-1826 | Human feces | Positive |
58 | S. enterica | enterica | Give | E | Nexidia | NEX-1609 | Food isolate | Positive |
59 | S. enterica | enterica | Hadar | C3 | ZHAW | N10-0099 | Human feces | Positive |
60 | S. enterica | enterica | Havana | G | Nexidia | NEX-1152 | Feed product | Positive |
61 | S. enterica | enterica | Heidelberg | B | Nexidia | NEX-1704 | Poultry | Positive |
62 | S. enterica | enterica | Hofit | Q | ZHAW | N18-1113 | Human feces | Positive |
63 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1151 | Food enrichment | Positive |
64 | S. enterica | enterica | Hvittingfoss | I | Nexidia | NEX-1467 | Food isolate | Positive |
65 | S. enterica | enterica | Indiana | B | Nexidia | NEX-1402 | Food product | Positive |
66 | S. enterica | enterica | Infantis | C1 | Nexidia | NEX-814 | Meat | Positive |
67 | S. enterica | enterica | Javiana | D1 | ZHAW | N1246-08 | Human feces | Positive |
68 | S. enterica | enterica | Johannesburg | R | ZHAW | N17-1932 | Human feces | Positive |
69 | S. enterica | enterica | Kasenyi | P | ZHAW | N20-0227 | Food | Positive |
70 | S. enterica | enterica | Kedougou | G2 | Nexidia | NEX-1111 | Tuna | Positive |
71 | S. enterica | enterica | Kentucky | C3 | Nexidia | NEX-1617 | Food isolate | Positive |
72 | S. enterica | enterica | Korovi | P | ZHAW | N16-0899 | Feed | Positive |
73 | S. enterica | enterica | Kottbus | C2 | Nexidia | NEX-1471 | Food isolate | Positive |
74 | S. enterica | enterica | Lagos | B | Nexidia | NEX-703 | Meat | Positive |
75 | S. enterica | enterica | Lille | C1 | Nexidia | NEX-296 | Food isolate | Positive |
76 | S. enterica | enterica | Litchfield | C2 | ZHAW | N18-1222 | Human feces | Positive |
77 | S. enterica | enterica | Livingstone | C1 | Nexidia | NEX-1645 | Food isolate | Positive |
78 | S. enterica | enterica | London | E1 | Nexidia | NEX-1666 | Food enrichment | Positive |
79 | S. enterica | enterica | Manchester | C2 | Nexidia | NEX-1658 | Food isolate | Positive |
80 | S. enterica | enterica | Manhattan | C3 | Nexidia | NEX-1560 | Food isolate | Positive |
81 | S. enterica | enterica | Mbandaka | C1 | ZHAW | N18-1863 | Human feces | Positive |
82 | S. enterica | enterica | Meleagridis | E1 | Nexidia | NEX-742 | Ground beef | Positive |
83 | S. enterica | enterica | Menston | C1 | ZHAW | N18-1184 | Human feces | Positive |
84 | S. enterica | enterica | Minnesota | L | ZHAW | N20-2630 | Food poultry | Positive |
85 | S. enterica | enterica | Mississippi | G | Nexidia | NEX-1764 | Food isolate | Positive |
86 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1025 | Cheese | Positive |
87 | S. enterica | enterica | Montevideo | C1 | CIP | 104583 | Monkey | Positive |
88 | S. enterica | enterica | Montevideo | C1 | Nexidia | NEX-1775 | Food isolate | Positive |
89 | S. enterica | enterica | Muenchen | C2 | Nexidia | NEX-1326 | Food isolate | Positive |
90 | S. enterica | enterica | Muenster | E1 | ZHAW | N520-08 | Human feces | Positive |
91 | S. enterica | enterica | Napoli | D1 | Nexidia | NEX-1863 | Food isolate | Positive |
92 | S. enterica | enterica | Newport | C2 | Nexidia | NEX-816 | Meat | Positive |
93 | S. enterica | enterica | Nima | M | Nexidia | NEX-1881 | Food isolate | Positive |
94 | S. enterica | enterica | Oranienburg | C1 | Nexidia | NEX-1725 | Rapeseed | Positive |
95 | S. enterica | enterica | Orion | E1 | Nexidia | NEX-1776 | Food isolate | Positive |
96 | S. enterica | enterica | Ouakam | D2 | Nexidia | NEX-837 | Food isolate | Positive |
97 | S. enterica | enterica | Panama | D1 | Nexidia | NEX-740 | Horse steak | Positive |
98 | S. enterica | enterica | Plymouth | D2 | ZHAW | N20-0792 | Human feces | Positive |
99 | S. enterica | enterica | Poona | G | ZHAW | N19-29 | Human feces | Positive |
100 | S. enterica | enterica | Ramatgan | N | Nexidia | NEX-311 | Food isolate | Positive |
101 | S. enterica | enterica | Reading | B | Nexidia | NEX-919 | Water | Positive |
102 | S. enterica | enterica | Regent | E1 | Nexidia | NEX-1555 | Food isolate | Positive |
103 | S. enterica | enterica | Rissen | C1 | Nexidia | NEX-1191 | Food isolate | Positive |
104 | S. enterica | enterica | Saintpaul | B | Nexidia | NEX-1389 | Food enrichment | Positive |
105 | S. enterica | enterica | Sandiego | B | ZHAW | N19-1171 | Human feces | Positive |
106 | S. enterica | enterica | Schwarzengrund | B | Nexidia | NEX-1571 | Food enrichment | Positive |
107 | S. enterica | enterica | Senftenberg | E4 | ZHAW | N2313-08 | Human feces | Positive |
108 | S. enterica | enterica | Stuivenberg | E4 | Nexidia | NEX-702 | Meat | Positive |
109 | S. enterica | enterica | Tennessee | C1 | Nexidia | NEX-1185 | Food isolate | Positive |
110 | S. enterica | enterica | Thompson | C1 | Nexidia | NEX-1569 | Food product | Positive |
111 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1640 | Fish meal | Positive |
112 | S. enterica | enterica | Typhimurium | B | ATCC | 14028 | Clinical | Positive |
113 | S. enterica | enterica | Typhimurium | B | Nexidia | NEX-1742 | Cheese | Positive |
114 | S. enterica | enterica | Umbilo | M | Nexidia | NEX-1413 | Food isolate | Positive |
115 | S. enterica | enterica | Veneziana | F | Nexidia | NEX-780 | Food isolate | Positive |
116 | S. enterica | enterica | Virchow | C1 | Nexidia | NEX-1454 | Food product | Positive |
117 | S. enterica | enterica | Virginia | C3 | ZHAW | N18-1861 | Human feces | Positive |
118 | S. enterica | enterica | Wandsworth | Q | ZHAW | N13-0958 | Human feces | Positive |
119 | S. enterica | enterica | Worthington | G | Nexidia | NEX-1880 | Food isolate | Positive |
120 | S. enterica | enterica | S.I | 1, 4, [5], 12:-:-nonmotile | Nexidia | NEX-998 | Goose viscera | Positive |
121 | S. enterica | enterica | S.I | I 4, [5], 12: i:- | Nexidia | NEX-1360 | Food enrichment | Positive |
DSMZ = Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany.
ZHAW = Zürcher Hochschule für Angewandte Wissenschaften, Wädenswil, Switzerland.
CCUG = Culture Collection University of Gothenburg, Goteborg, Sweden.
APHA = Animal Plant Health Agency, Addlestone, United Kingdom.
Nexidia = Nexidia Microbial Strain Collection, Dijon, France.
IP = Institut Pasteur, Paris, France.
CIP = Collection de l’Institut Pasteur, Paris, France.
No. . | Genus . | Species . | Reference . | Origin . | Nonselective broth . | NEMIS SalM broth . |
---|---|---|---|---|---|---|
1 | Acetobacter | acetii | DSMa 3508 | Alcohol turned to vinegar | Negative | −b |
2 | Aeromonas | hydrophila | ATCCc 7966 | Tin of milk with a fishy odor | Negative | – |
3 | Bacillus | cereus | CIPd 78.3 | Contaminant pharmaceutical preparation | Negative | – |
4 | Citrobacter | braakii | ATCC 51113 | Snake | Negative | – |
5 | Citrobacter | freundii | NEXe 1694 | Food isolate | Negative | – |
6 | Citrobacter | koseri | ATCC 27028 | Blood culture | Negative | – |
7 | Cronobacter | sakazakii | CIP 57.33 | Tin, dried milk | Negative | – |
8 | Enterobacter | absuriae | FS2f | Coconut water | Negative | – |
9 | Enterobacter | cloaceae | DSM 16657 | Maize plant | Negative | – |
10 | Enterococcus | faecalis | ATCC 51299 | Peritoneal fluid, St. Louis, MO | Negative | – |
11 | Escherichia | coli | CIP 54.117 | Human, feces | Positive | Negative |
12 | Escherichia | albertii | DSM 17582 | Stool from diarrheal child | Negative | – |
13 | Escherichia | hermanii | DSM 4560 | Toe, 17-year-old female | Negative | – |
14 | Hafnia | alvei | ATCC 51815 | Milk, Minnesota | Negative | – |
15 | Klebsiella | oxytoca | ATCC 51817 | Milk, Minnesota | Negative | – |
16 | Lactobacillus | sakei | ATCC 15521 | Moto, starter of sake | Negative | – |
17 | Listeria | monocytogenes | ATCC 19114 | Tissue, animal | Negative | – |
18 | Pantoea | agglomerans | CIP 82.100 | Corn crop, Canada | Negative | – |
19 | Proteus | vulgaris | ATCC 8427 | Inner ear infection | Negative | – |
20 | Proteus | mirabilis | ATCC 7002 | Urine of patient with kidney stones | Negative | – |
21 | Providencia | alcalifaciens | DSM 30120 | Feces | Negative | – |
22 | Pseudomonas | aeruginosa | ATCC 9027 | Outer ear infection | Negative | – |
23 | Pseudomonas | fluorescens | ATCC 13525 | Pre-filter tanks | Negative | – |
24 | Rahnella | aquatilis | Probe 8.2f | Environment | Negative | – |
25 | Serratia | liquefaciens | DSM 4487 | Milk; Cork, Ireland | Negative | – |
26 | Serratia | marcescens | CIP 53.90 | Milk, Delft, The Netherlands | Negative | – |
27 | Shigella | boydii | RKIg 03/07455 | Clinical | Negative | – |
28 | Shigella | flexneri | RKI 03/03709-1 | Clinical | Negative | – |
29 | Shigella | sonnei | RKI 02/03828 | Clinical | Negative | – |
30 | Staphylococcus | aureus | ATCC 6538 | Human lesion | Negative | – |
31 | Streptococcus | oralis | 102922f | Human mouth | Negative | – |
32 | Yersinia | enterocolitica | 9610f | Tissue, human | Negative | – |
No. . | Genus . | Species . | Reference . | Origin . | Nonselective broth . | NEMIS SalM broth . |
---|---|---|---|---|---|---|
1 | Acetobacter | acetii | DSMa 3508 | Alcohol turned to vinegar | Negative | −b |
2 | Aeromonas | hydrophila | ATCCc 7966 | Tin of milk with a fishy odor | Negative | – |
3 | Bacillus | cereus | CIPd 78.3 | Contaminant pharmaceutical preparation | Negative | – |
4 | Citrobacter | braakii | ATCC 51113 | Snake | Negative | – |
5 | Citrobacter | freundii | NEXe 1694 | Food isolate | Negative | – |
6 | Citrobacter | koseri | ATCC 27028 | Blood culture | Negative | – |
7 | Cronobacter | sakazakii | CIP 57.33 | Tin, dried milk | Negative | – |
8 | Enterobacter | absuriae | FS2f | Coconut water | Negative | – |
9 | Enterobacter | cloaceae | DSM 16657 | Maize plant | Negative | – |
10 | Enterococcus | faecalis | ATCC 51299 | Peritoneal fluid, St. Louis, MO | Negative | – |
11 | Escherichia | coli | CIP 54.117 | Human, feces | Positive | Negative |
12 | Escherichia | albertii | DSM 17582 | Stool from diarrheal child | Negative | – |
13 | Escherichia | hermanii | DSM 4560 | Toe, 17-year-old female | Negative | – |
14 | Hafnia | alvei | ATCC 51815 | Milk, Minnesota | Negative | – |
15 | Klebsiella | oxytoca | ATCC 51817 | Milk, Minnesota | Negative | – |
16 | Lactobacillus | sakei | ATCC 15521 | Moto, starter of sake | Negative | – |
17 | Listeria | monocytogenes | ATCC 19114 | Tissue, animal | Negative | – |
18 | Pantoea | agglomerans | CIP 82.100 | Corn crop, Canada | Negative | – |
19 | Proteus | vulgaris | ATCC 8427 | Inner ear infection | Negative | – |
20 | Proteus | mirabilis | ATCC 7002 | Urine of patient with kidney stones | Negative | – |
21 | Providencia | alcalifaciens | DSM 30120 | Feces | Negative | – |
22 | Pseudomonas | aeruginosa | ATCC 9027 | Outer ear infection | Negative | – |
23 | Pseudomonas | fluorescens | ATCC 13525 | Pre-filter tanks | Negative | – |
24 | Rahnella | aquatilis | Probe 8.2f | Environment | Negative | – |
25 | Serratia | liquefaciens | DSM 4487 | Milk; Cork, Ireland | Negative | – |
26 | Serratia | marcescens | CIP 53.90 | Milk, Delft, The Netherlands | Negative | – |
27 | Shigella | boydii | RKIg 03/07455 | Clinical | Negative | – |
28 | Shigella | flexneri | RKI 03/03709-1 | Clinical | Negative | – |
29 | Shigella | sonnei | RKI 02/03828 | Clinical | Negative | – |
30 | Staphylococcus | aureus | ATCC 6538 | Human lesion | Negative | – |
31 | Streptococcus | oralis | 102922f | Human mouth | Negative | – |
32 | Yersinia | enterocolitica | 9610f | Tissue, human | Negative | – |
DSM = Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany.
Negative strains were not tested in the NEMIS SalM broth.
ATCC = American Type Culture Collection, Manassas, VA.
CIP = Collection de l’Institut Pasteur, Paris, France.
NEX = Nexidia Microbial Strain Collection, Dijon, France.
NEMIS Microbial Strain collection, Dübendorf, Switzerland.
RKI = Robert Koch Institute, Berlin, Germany.
No. . | Genus . | Species . | Reference . | Origin . | Nonselective broth . | NEMIS SalM broth . |
---|---|---|---|---|---|---|
1 | Acetobacter | acetii | DSMa 3508 | Alcohol turned to vinegar | Negative | −b |
2 | Aeromonas | hydrophila | ATCCc 7966 | Tin of milk with a fishy odor | Negative | – |
3 | Bacillus | cereus | CIPd 78.3 | Contaminant pharmaceutical preparation | Negative | – |
4 | Citrobacter | braakii | ATCC 51113 | Snake | Negative | – |
5 | Citrobacter | freundii | NEXe 1694 | Food isolate | Negative | – |
6 | Citrobacter | koseri | ATCC 27028 | Blood culture | Negative | – |
7 | Cronobacter | sakazakii | CIP 57.33 | Tin, dried milk | Negative | – |
8 | Enterobacter | absuriae | FS2f | Coconut water | Negative | – |
9 | Enterobacter | cloaceae | DSM 16657 | Maize plant | Negative | – |
10 | Enterococcus | faecalis | ATCC 51299 | Peritoneal fluid, St. Louis, MO | Negative | – |
11 | Escherichia | coli | CIP 54.117 | Human, feces | Positive | Negative |
12 | Escherichia | albertii | DSM 17582 | Stool from diarrheal child | Negative | – |
13 | Escherichia | hermanii | DSM 4560 | Toe, 17-year-old female | Negative | – |
14 | Hafnia | alvei | ATCC 51815 | Milk, Minnesota | Negative | – |
15 | Klebsiella | oxytoca | ATCC 51817 | Milk, Minnesota | Negative | – |
16 | Lactobacillus | sakei | ATCC 15521 | Moto, starter of sake | Negative | – |
17 | Listeria | monocytogenes | ATCC 19114 | Tissue, animal | Negative | – |
18 | Pantoea | agglomerans | CIP 82.100 | Corn crop, Canada | Negative | – |
19 | Proteus | vulgaris | ATCC 8427 | Inner ear infection | Negative | – |
20 | Proteus | mirabilis | ATCC 7002 | Urine of patient with kidney stones | Negative | – |
21 | Providencia | alcalifaciens | DSM 30120 | Feces | Negative | – |
22 | Pseudomonas | aeruginosa | ATCC 9027 | Outer ear infection | Negative | – |
23 | Pseudomonas | fluorescens | ATCC 13525 | Pre-filter tanks | Negative | – |
24 | Rahnella | aquatilis | Probe 8.2f | Environment | Negative | – |
25 | Serratia | liquefaciens | DSM 4487 | Milk; Cork, Ireland | Negative | – |
26 | Serratia | marcescens | CIP 53.90 | Milk, Delft, The Netherlands | Negative | – |
27 | Shigella | boydii | RKIg 03/07455 | Clinical | Negative | – |
28 | Shigella | flexneri | RKI 03/03709-1 | Clinical | Negative | – |
29 | Shigella | sonnei | RKI 02/03828 | Clinical | Negative | – |
30 | Staphylococcus | aureus | ATCC 6538 | Human lesion | Negative | – |
31 | Streptococcus | oralis | 102922f | Human mouth | Negative | – |
32 | Yersinia | enterocolitica | 9610f | Tissue, human | Negative | – |
No. . | Genus . | Species . | Reference . | Origin . | Nonselective broth . | NEMIS SalM broth . |
---|---|---|---|---|---|---|
1 | Acetobacter | acetii | DSMa 3508 | Alcohol turned to vinegar | Negative | −b |
2 | Aeromonas | hydrophila | ATCCc 7966 | Tin of milk with a fishy odor | Negative | – |
3 | Bacillus | cereus | CIPd 78.3 | Contaminant pharmaceutical preparation | Negative | – |
4 | Citrobacter | braakii | ATCC 51113 | Snake | Negative | – |
5 | Citrobacter | freundii | NEXe 1694 | Food isolate | Negative | – |
6 | Citrobacter | koseri | ATCC 27028 | Blood culture | Negative | – |
7 | Cronobacter | sakazakii | CIP 57.33 | Tin, dried milk | Negative | – |
8 | Enterobacter | absuriae | FS2f | Coconut water | Negative | – |
9 | Enterobacter | cloaceae | DSM 16657 | Maize plant | Negative | – |
10 | Enterococcus | faecalis | ATCC 51299 | Peritoneal fluid, St. Louis, MO | Negative | – |
11 | Escherichia | coli | CIP 54.117 | Human, feces | Positive | Negative |
12 | Escherichia | albertii | DSM 17582 | Stool from diarrheal child | Negative | – |
13 | Escherichia | hermanii | DSM 4560 | Toe, 17-year-old female | Negative | – |
14 | Hafnia | alvei | ATCC 51815 | Milk, Minnesota | Negative | – |
15 | Klebsiella | oxytoca | ATCC 51817 | Milk, Minnesota | Negative | – |
16 | Lactobacillus | sakei | ATCC 15521 | Moto, starter of sake | Negative | – |
17 | Listeria | monocytogenes | ATCC 19114 | Tissue, animal | Negative | – |
18 | Pantoea | agglomerans | CIP 82.100 | Corn crop, Canada | Negative | – |
19 | Proteus | vulgaris | ATCC 8427 | Inner ear infection | Negative | – |
20 | Proteus | mirabilis | ATCC 7002 | Urine of patient with kidney stones | Negative | – |
21 | Providencia | alcalifaciens | DSM 30120 | Feces | Negative | – |
22 | Pseudomonas | aeruginosa | ATCC 9027 | Outer ear infection | Negative | – |
23 | Pseudomonas | fluorescens | ATCC 13525 | Pre-filter tanks | Negative | – |
24 | Rahnella | aquatilis | Probe 8.2f | Environment | Negative | – |
25 | Serratia | liquefaciens | DSM 4487 | Milk; Cork, Ireland | Negative | – |
26 | Serratia | marcescens | CIP 53.90 | Milk, Delft, The Netherlands | Negative | – |
27 | Shigella | boydii | RKIg 03/07455 | Clinical | Negative | – |
28 | Shigella | flexneri | RKI 03/03709-1 | Clinical | Negative | – |
29 | Shigella | sonnei | RKI 02/03828 | Clinical | Negative | – |
30 | Staphylococcus | aureus | ATCC 6538 | Human lesion | Negative | – |
31 | Streptococcus | oralis | 102922f | Human mouth | Negative | – |
32 | Yersinia | enterocolitica | 9610f | Tissue, human | Negative | – |
DSM = Deutsche Sammlung von Mikroorganismen und Zellkulturen, Braunschweig, Germany.
Negative strains were not tested in the NEMIS SalM broth.
ATCC = American Type Culture Collection, Manassas, VA.
CIP = Collection de l’Institut Pasteur, Paris, France.
NEX = Nexidia Microbial Strain Collection, Dijon, France.
NEMIS Microbial Strain collection, Dübendorf, Switzerland.
RKI = Robert Koch Institute, Berlin, Germany.
Matrix Study
Methods.—The N-Light Salmonella method was compared to the cultural reference method for detection of Salmonella spp. (ISO 6579–1:2017) on environmental surfaces. Three types of environmental surfaces were tested: stainless steel [AISI 304 (1.4301), grade 2b finish], plastic (polystyrene) and ceramic (glazed earthen material). For each environmental surface, the study included five replicate test portions of uninoculated matrix, 20 replicate test portions at a low level to yield fractionally positive results, and five replicate test portions at a high level to yield consistently positive results. Fractionally positive results, those in which at least one of the methods (candidate or reference) yields 5–15 positive results out of 20 replicates examined for the low level of inoculation, are required for each matrix tested. This is an unpaired study. Separate test portions were prepared for the candidate method and reference method.
Three Salmonella enterica subsp. enterica strains were used: S. Typhimurium ATCC 14028 (stainless steel); S. Enteritidis ATCC 49223 (plastic), and S. Montevideo CIP 104583 (ceramic). For stainless steel, Citrobacter koseri ATCC 27028 was used as a competitor organism. For pure inoculum preparation, the working suspension of each strain was diluted in fresh TSB to obtain the required concentration. Bacterial concentration of inoculum was adjusted by measurement of the optical density at 600 nm and was controlled by plating the inoculum in triplicate on Tryptic Soy Agar plates (TSA) after serial decimal dilution if needed. After 24 h of incubation at 37 ± 2°C, colonies were counted on plates that presented between 15 and 300 colonies.
For the matrix study with competitive flora, a competitor organism (C. koseri ATCC 27028) was co-inoculated with S. Typhimurium ATCC 14028 on a stainless-steel surface. The competitor organism was inoculated at 10–100 times the level of the target strain. For this, a mixed culture was prepared. The working cultures of S. Typhimurium ATCC 14028 and C. koseri ATCC 27028 were diluted in fresh TSB to obtain a concentration of about twice the target concentration. The two diluted cultures were then mixed (1:1) to obtain the inoculum.
Three types of surfaces were used in the matrix study: stainless steel [AISI 304 (1.4301), grade 2 b finish], rigid plastic (polystyrene), and ceramic (glazed earthen material). The three types of surfaces were supplied by NEMIS Technology and NEXIDIA. For each type of surface, nine 1″ × 1″ (6.25 cm2) areas were defined on 4.7″ × 4.7″ plates (144 cm2). Before using in the matrix study, plates were washed with a specific dishwashing liquid (Anios) and decontaminated by making a 15 min ethanol 70% (v/v) bath. The plates were then removed from the bath and allowed to dry for at least 1 h under the flow of a biosafety cabinet. Each 1″ × 1″ area was inoculated with 100 µL of adequate inoculum or sterile TSB. Drops were spread using a sterile loop to distribute the inoculum evenly over the surface. For drying the inoculum, environmental surfaces were placed in closed Petri dishes (245 cm × 245 cm) and under laminar flow working for 18 h. During drying, room temperature was kept at 22 ± 2°C.
For the reference method, premoistened classic swabs with BPW were used. Environmental surfaces were swabbed using firm and even pressure vertically (approximately 10 times), and then the sampler was flipped and the other side used to sample horizontally (approximately 10 times) and diagonally (approximately 10 times). Swabs were introduced in a closed tube and stored at room temperature for 2 h ± 15 min prior to analysis. Then they were introduced in tubes containing 9 mL of BPW. Tubes were mixed using a vortex for 10 s and then incubated at 37 ± 1°C for 18 h ± 2 h. After the incubation period, a 0.1 mL aliquot of the primary enrichment was transferred into 10 mL of Rappaport-Vassiliadis medium with soya (RVS), and 1.0 mL was transferred into 9 mL of Muller-Kauffmann tetrathionate-novobiocin broth (MKTTn). The RVS broth and the MKTTn were incubated at 41.5 ± 1°C for 24 ± 3 h and at 37 ± 1°C for 24 ± 3 h, respectively. From both secondary enrichments, a loopful was streaked onto two selective agars: XLD agar plates and chromogenic BSA plates. Plates were incubated at 37 ± 1°C for 24 ± 2 h. For the confirmation step, typical colonies for each sample were selected and streaked onto TSA. Plates were incubated at 37 ± 1°C for 18–24 h. Biochemical (triple sugar iron agar test, urea agar test, and L-lysine decarboxylation medium test) and serological (Polyvalent O and H serology test) tests were performed for each presumptive sample.
For the N-Light Salmonella Risk method, premoistened flocked swabs with BPW were used. Environmental surfaces were swabbed using firm and even pressure vertically (approximately 10 times), and then the sampler was flipped and the other side used to sample horizontally (approximately 10 times) and diagonally (approximately 10 times). Swabs were introduced in a closed tube and stored at room temperature for 2 h ± 15 min prior to analysis. Then they were introduced into specific tubes containing 2 mL of NEMIS SalM broth (NEB). The tubes were mixed using a vortex for 10 s and incubated in a dry heating block at 37 ± 1°C for 24 ± 2 h. After the incubation period, an AquaSpark and lysis tablets were introduced in each enrichment tube and dissolved by 15 s mixing with a vortex. Tubes were incubated for 3 min at 37 ± 2°C (dry heat block) before being read in luminometer. For all test portions, before adding the AquaSpark and lysis tablet, a 0.1 mL aliquot of enrichment was transferred to 9 mL of BPW and incubated at 37°C for 18 ± 2 h. After incubation, secondary enrichments (RVS and MKKTn) and confirmation were performed according to ISO 6579:2017. Additionally, from the NEMIS sample tube, a 10 µL aliquot of enrichment was streaked onto XLD Agar and chromogenic BSA plates, and plates were incubated at 37 ± 1°C for 24 ± 2 h. Then, the confirmation steps were carried out as described in reference method.
Results.—For each surface type, PODs with 95% CIs were calculated for the candidate method’s presumptive and confirmed results and the reference method’s results for each contamination level. dPODs were determined between the candidate method’s presumptive and confirmed results, as well as between the candidate method’s confirmed results and the reference method’s results. No differences were observed between the candidate method’s presumptive and confirmed results using the reference method confirmation procedure or the NEMIS recommended alternative confirmation procedure (Tables 3 and 4). Small differences were observed between the candidate method’s confirmed results and the reference method’s results, which are not unexpected because of the unpaired study design. However, no statistically significant differences were evident (Table 5).
N-Light Salmonella Risk: Presumptive versus confirmed (traditional with secondary enrichments)
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in duplicate.
N = Number of test potions.
x = Number of positive test portions.
PODCP = Candidate method presumptive positive outcomes divided by the total number of trials.
PODCC = Candidate method confirmed positive outcomes divided by the total number of trials.
dPODCP = Difference between the candidate method presumptive result and candidate method confirmed result POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by AOAC qualified independent laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
N-Light Salmonella Risk: Presumptive versus confirmed (traditional with secondary enrichments)
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in duplicate.
N = Number of test potions.
x = Number of positive test portions.
PODCP = Candidate method presumptive positive outcomes divided by the total number of trials.
PODCC = Candidate method confirmed positive outcomes divided by the total number of trials.
dPODCP = Difference between the candidate method presumptive result and candidate method confirmed result POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by AOAC qualified independent laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
N-Light Salmonella Risk: Presumptive versus alternative confirmed (direct streaks to agar plates)
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in triplicate.
N = Number of test potions.
x = Number of positive test portions.
PODCP = Candidate method presumptive positive outcomes divided by the total number of trials.
PODCC = Candidate method confirmed positive outcomes divided by the total number of trials.
dPODCP = Difference between the candidate method presumptive result and candidate method confirmed result POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by AOAC qualified independent laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
N-Light Salmonella Risk: Presumptive versus alternative confirmed (direct streaks to agar plates)
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method presumptive . | Candidate method confirmed . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCPd . | 95% CI . | x . | PODCCe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 12 | 0.60 | (0.39, 0.78) | 0.00 | (−0.28, 0.28) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 9 | 0.45 | (0.26, 0.66) | 0.00 | (−0.28, 0.28) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 14 | 0.70 | (0.48, 0.85) | 0.00 | (−0.27, 0.27) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 15 | 0.75 | (0.53, 0.89) | 0.00 | (−0.26, 0.26) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in triplicate.
N = Number of test potions.
x = Number of positive test portions.
PODCP = Candidate method presumptive positive outcomes divided by the total number of trials.
PODCC = Candidate method confirmed positive outcomes divided by the total number of trials.
dPODCP = Difference between the candidate method presumptive result and candidate method confirmed result POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by AOAC qualified independent laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
Method comparison results: N-Light Salmonella Risk (traditional confirmation) versus ISO 6579-1
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method confirmed . | ISO 6579-1 . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCd . | 95% CI . | x . | PODRe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 17 | 0.85 | (0.64, 0.95) | −0.25 | (−0.48, 0.03) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 8 | 0.40 | (0.22, 0.61) | 0.05 | (−0.24, 0.33) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 15 | 0.75 | (0.53, 0.89) | −0.05 | (−0.31, 0.22) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 11 | 0.55 | (0.34, 0.74) | 0.20 | (−0.09, 0.45) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method confirmed . | ISO 6579-1 . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCd . | 95% CI . | x . | PODRe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 17 | 0.85 | (0.64, 0.95) | −0.25 | (−0.48, 0.03) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 8 | 0.40 | (0.22, 0.61) | 0.05 | (−0.24, 0.33) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 15 | 0.75 | (0.53, 0.89) | −0.05 | (−0.31, 0.22) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 11 | 0.55 | (0.34, 0.74) | 0.20 | (−0.09, 0.45) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in triplicate.
N = Number of test potions.
x = Number of positive test portions.
PODC = Candidate method presumptive positive outcomes confirmed positive divided by the total number of trials.
PODR = Reference method confirmed positive outcomes divided by the total number of trials.
dPODC = Difference between the candidate method and reference method POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by independent AOAC certified laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
Method comparison results: N-Light Salmonella Risk (traditional confirmation) versus ISO 6579-1
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method confirmed . | ISO 6579-1 . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCd . | 95% CI . | x . | PODRe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 17 | 0.85 | (0.64, 0.95) | −0.25 | (−0.48, 0.03) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 8 | 0.40 | (0.22, 0.61) | 0.05 | (−0.24, 0.33) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 15 | 0.75 | (0.53, 0.89) | −0.05 | (−0.31, 0.22) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 11 | 0.55 | (0.34, 0.74) | 0.20 | (−0.09, 0.45) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
Matrix . | Strain . | cfu/Test areaa . | Nb . | Candidate method confirmed . | ISO 6579-1 . | dPODCPf . | 95% CIg . | ||||
---|---|---|---|---|---|---|---|---|---|---|---|
xc . | PODCd . | 95% CI . | x . | PODRe . | 95% CI . | ||||||
Stainless steel |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
46 & 905 | 20 | 12 | 0.60 | (0.39, 0.78) | 17 | 0.85 | (0.64, 0.95) | −0.25 | (−0.48, 0.03) | ||
600 & 8140 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Stainless steeli |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
80 & 910 | 20 | 9 | 0.45 | (0.26, 0.66) | 8 | 0.40 | (0.22, 0.61) | 0.05 | (−0.24, 0.33) | ||
450 & 3200 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Plastic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
34 | 20 | 14 | 0.70 | (0.48, 0.85) | 15 | 0.75 | (0.53, 0.89) | −0.05 | (−0.31, 0.22) | ||
343 | 5 | 5 | 1.00 | (0.57, 1.00) | 5 | 1.00 | (0.57, 1.00) | 0.00 | (−0.43, 0.43) | ||
Ceramic |
| 0 | 5 | 0 | 0.00 | (0.00, 0.43) | 0 | 0.00 | (0.00, 0.43) | 0.00 | (−0.43, 0.43) |
373 | 20 | 15 | 0.75 | (0.53, 0.89) | 11 | 0.55 | (0.34, 0.74) | 0.20 | (−0.09, 0.45) | ||
3700 | 5 | 3 | 0.60 | (0.23, 0.88) | 3 | 0.60 | (0.23, 0.88) | 0.00 | (−0.46, 0.46) |
cfu/Test area determined by plating the inoculum in triplicate.
N = Number of test potions.
x = Number of positive test portions.
PODC = Candidate method presumptive positive outcomes confirmed positive divided by the total number of trials.
PODR = Reference method confirmed positive outcomes divided by the total number of trials.
dPODC = Difference between the candidate method and reference method POD values.
95% CI = If the confidence interval of a dPOD does not contain zero, then the difference is statistically significant at the 5% level.
ATCC = American Type Culture Collection, Manassas, VA, USA.
Performed by independent AOAC certified laboratory Q Laboratories, Cincinnati, OH, USA.
CIP = Collection de l’Institut Pasteur, Paris, France.
Independent Laboratory Studies
Methods.—The study was conducted by the independent laboratory. The N-Light Salmonella Risk method was compared to the ISO 6579-1:2017 reference method using 30 unpaired sample replicates each. Within each sample set, there were five uninoculated samples, 20 low-level inoculated samples, and five high-level inoculated samples following an unpaired study design. After sampling, swabs were incubated at 37 ± 1°C for 24 ± 2 h before being analyzed by the NEMIS Technologies BTL1 luminometer. The reference method swabs were evaluated at 34–38°C after 18 ± 2 h of enrichment. Regardless of the presumptive results for the method comparison, all samples were culturally confirmed following ISO 6579-1:2017 (selective enrichment through colony confirmation). In addition, candidate method enriched samples were confirmed using an alternative approach by streaking 10 µL from each enriched portion directly to XLD and a chromogenic agar (BSA) and incubated at 37 ± 1°C for 24 ± 3 h. Final confirmation for all samples was obtained by Bruker MALDI Biotyper following AOAC Official Method of AnalysisSM2017.10 (5).
For stainless-steel surface inoculation, a liquid culture of S. Typhimurium ATCC 14028 and C. koseri ATCC 27156, which acted as the competitor organism, was used for inoculation. Both cultures were propagated on Tryptic Soy Agar with 5% Sheep Blood (SBA) from a stock culture stored at −70°C. The SBA was incubated for 24 ± 2 h at 35 ± 1°C. A single colony was transferred to Brain Heart Infusion (BHI) broth and incubated for 24 ± 2 h at 35 ± 1°C.
The S. Typhimurium culture was diluted in BHI broth to a low level expected to yield fractional results and a high level expected to yield all positive results. The C. koseri culture was diluted in BHI broth to 10 times the concentration of the target organism on a stainless-steel surface. To determine the inoculation level of the environmental surfaces, aliquots of each inoculum were plated onto TSA and incubated for 24 ± 2 h at 35 ± 1°C.
A stainless-steel surface (1″ × 1″ test area) was inoculated with 0.1 mL of the diluted inoculum and allowed to dry for 16–24 h at room temperature (18–25°C) prior to sampling. For the noninoculated test portions, sterile BHI broth was used. The surfaces were sampled by premoistening a swab in BPW. The surfaces were swabbed vertically approximately 10 times, and then the sampler was turned over and the other side was used to swab horizontally approximately 10 times and diagonally approximately 10 times. Swabs were allowed to sit at room temperature for 2 h ± 15 min prior to analysis.
For the reference method, swabs were premoistened in 1 mL of BPW. Surfaces were swabbed vertically approximately 10 times, and then the sampler was turned over and the surface was swabbed horizontally approximately 10 times and diagonally approximately 10 times. Swabs were stored at room temperature (20–25°C) for 2 h ± 15 min. After 2 h, swabs were placed into a test tube containing 9 mL of BPW and incubated at 34–38°C for 18 ± 2 h. At 18 h, 0.1 mL of the primary enrichment was transferred into 10 mL of RVS, and 1.0 mL was transferred into 10 mL of MKTTn. RVS tubes were incubated at 41.5 ± 1°C for 24 ± 3 h, and MKTTn tubes were incubated at 37 ± 1°C for 24 ± 3 h. After incubation, RVS and MKTTn broths were streaked onto XLD and BSA. Plates were incubated at 37 ± 1°C for 24 ± 3 h.
Plates were examined for suspect colonies, and, if present, one typical colony from each agar was selected and streaked onto a nonselective agar. Plates were incubated at 34–38°C for 24 ± 3 h. Polyvalent O and H serology tests were performed. Final confirmation was conducted using the Bruker MALDI Biotyper following AOAC Method 2017.09.
For the N-Light Salmonella Risk method, stainless-steel surface test areas were sampled as described previously. After incubation, all test portions were processed using the NEMIS Technologies BTL1 luminometer. Regardless of presumptive results, all enriched portions went through the ISO 6579-1:2017 reference method confirmation process (transfer to selective enrichment and plating) and an alternative confirmation process (direct streak onto XLD and BSA). Final confirmed results were obtained by serological agglutination (poly O and poly H) and the Bruker MALDI Biotyper following AOAC Method 2017.09.
Results.—The N-Light Salmonella method successfully detected Salmonella on stainless-steel environmental surfaces. When comparing results obtained from the BTL1 luminometer to the confirmed results, no false positives or false negatives were observed. Using POD analysis (Least Cost Formulations, Ltd., AOAC Binary Data Interlaboratory Study Workbook Version 5.1, Virginia Beach, VA), no statistically significant differences were observed between the number of positive samples detected by the reference method and the NEMIS Technologies Salmonella assay (Tables 3–5).
Discussion
The N-Light Salmonella assay was able to detect all the Salmonella strains tested during the inclusivity study, including S. bongori and S. enterica. Moreover, it did not detect 32 strains of non-Salmonella in which closely related species such as E. coli and Citrobacter were tested. The specificity of the kit was therefore validated according to the inclusivity/exclusivity study. However, during the method developer study, some Enterobacteriaceae strains were able to exhibit an enzymatic activity used by the N-Light assay. These included strains of E. coli (DSM 1576 and ATCC 35218), Klebsiella oxytoca (ATCC 13182), and Citrobacter freundii (two of NEMIS’s isolated strains). This activity generates a low positive signal, leading to presumptive positive results when bacteria are grown in nonselective broth. However, NEMIS proprietary enrichment broth controlled the growth of these bacteria and reduced the unspecific signal. It can be assumed that within a complex food environment there is a limited risk of false positive results depending on the sampling area. This may be acceptable for a surface screening test.
Concerning the matrix study, on stainless steel with a competitor microorganism, the N-Light Salmonella assay did not shown differences in fractional results compared to the ISO 6579-1 during method developer and independent laboratory studies. In the same way, there is no significant difference between the two methods when plastic or ceramic were used as environmental surfaces.
Conclusions
The data from these studies support the product claim that the NEMIS Technologies N-Light Salmonella Risk assay can detect Salmonella spp. from environmental surfaces (stainless steel, plastic, and ceramic) when using the BTL1 luminometer. The results obtained by the POD analysis of the method comparison study demonstrated that there were no statistically significant differences between the number of positive samples detected by the candidate and the ISO 6579-1:2017 methods for the three environmental surfaces.
Submitting Company
NEMIS Technologies AG
Riedhofstrasse 11
8804 Au (ZH), Switzerland
Independent Laboratory
Q Laboratories
Cincinnati, OH, USA 45204
Reviewers
Thomas Hammack
US Food and Drug Administration Center for Food Safety and Applied Nutrition
Maryland, USA
James Agin
Independent Consultant
Ohio, USA
Wayne Ziemer
Independent Consultant
Georgia, USA
References
ISO 6579-1:2017 Microbiology of the food chain—Horizontal method for the detection, enumeration and serotyping of Salmonella—Part 1: Detection of Salmonella spp. https://www.iso.org/standard/56712.html (accessed January 2021)