Volume 40, Issue W1
July 2012
ISSN 0305-1048
EISSN 1362-4962
Issue navigation
Volume 40, Issue W1, July 2012
Web Server issue
Editorial
Editorial
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W1–W2, https://doi.org/10.1093/nar/gks607
Articles
A decade of web server updates at the bioinformatics links directory: 2003–2012
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W3–W12, https://doi.org/10.1093/nar/gks632
Tags:
bioinformatics, directories, nucleic acids, community
MAGIA2: from miRNA and genes expression data integrative analysis to microRNA–transcription factor mixed regulatory circuits (2012 update)
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W13–W21, https://doi.org/10.1093/nar/gks460
PsRobot: a web-based plant small RNA meta-analysis toolbox
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W22–W28, https://doi.org/10.1093/nar/gks554
Tags:
internet, micrornas, origin of life, plants, rna, small
Rtips: fast and accurate tools for RNA 2D structure prediction using integer programming
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W29–W34, https://doi.org/10.1093/nar/gks412
NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W35–W41, https://doi.org/10.1093/nar/gks513
Tags:
rna, molecule, atom, graphical displays, nucleic acids
SETTER: web server for RNA structure comparison
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W42–W48, https://doi.org/10.1093/nar/gks560
CARNA—alignment of RNA structure ensembles
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W49–W53, https://doi.org/10.1093/nar/gks491
Tags:
base pairing, rna, consensus, benchmarking, gold standard
VARIANT: Command Line, Web service and Web interface for fast and accurate functional characterization of variants found by Next-Generation Sequencing
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W54–W58, https://doi.org/10.1093/nar/gks572
SAVoR: a server for sequencing annotation and visualization of RNA structures
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W59–W64, https://doi.org/10.1093/nar/gks310
SNPnexus: a web server for functional annotation of novel and publicly known genetic variants (2012 update)
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W65–W70, https://doi.org/10.1093/nar/gks364
Tags:
alleles, community, cytogenetics, genes, genetic disorder
KD4v: comprehensible knowledge discovery system for missense variant
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W71–W75, https://doi.org/10.1093/nar/gks474
VarioWatch: providing large-scale and comprehensive annotations on human genomic variants in the next generation sequencing era
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W76–W81, https://doi.org/10.1093/nar/gks397
TaxMan: a server to trim rRNA reference databases and inspect taxonomic coverage
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W82–W87, https://doi.org/10.1093/nar/gks418
METAGENassist: a comprehensive web server for comparative metagenomics
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W88–W95, https://doi.org/10.1093/nar/gks497
Tags:
metagenomics, phenotype, metadata, genome, rna, ribosomal, 16s
QGRS-H Predictor: a web server for predicting homologous quadruplex forming G-rich sequence motifs in nucleotide sequences
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W96–W103, https://doi.org/10.1093/nar/gks422
Tags:
base sequence, rna, messenger, rna, genes, genome
The XXmotif web server for eXhaustive, weight matriX-based motif discovery in nucleotide sequences
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W104–W109, https://doi.org/10.1093/nar/gks602
Tags:
base sequence, binding sites, color, dna, functional genomics
LAHEDES: the LAGLIDADG homing endonuclease database and engineering server
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W110–W116, https://doi.org/10.1093/nar/gks365
Tags:
dna, endonuclease, engineering, enzymes, genes
TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W117–W122, https://doi.org/10.1093/nar/gks608
SurvNet: a web server for identifying network-based biomarkers that most correlate with patient survival data
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W123–W126, https://doi.org/10.1093/nar/gks386
MetaboAnalyst 2.0—a comprehensive server for metabolomic data analysis
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W127–W133, https://doi.org/10.1093/nar/gks374
Tags:
metabolomics, metabolites, chest pain units
DroPNet: a web portal for integrated analysis of Drosophila protein–protein interaction networks
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W134–W139, https://doi.org/10.1093/nar/gks434
IntScore: a web tool for confidence scoring of biological interactions
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W140–W146, https://doi.org/10.1093/nar/gks492
BIPS: BIANA Interolog Prediction Server. A tool for protein–protein interaction inference
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W147–W151, https://doi.org/10.1093/nar/gks553
MAGNET: MicroArray Gene expression and Network Evaluation Toolkit
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W152–W156, https://doi.org/10.1093/nar/gks526
Tags:
gene expression, genes, magnets, datasets, software
NetAligner—a network alignment server to compare complexes, pathways and whole interactomes
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W157–W161, https://doi.org/10.1093/nar/gks446
Tags:
complex, mice, anatomy, regional, arabidopsis, bioinformatics
GENIES: gene network inference engine based on supervised analysis
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W162–W167, https://doi.org/10.1093/nar/gks459
Inferring the regulatory network behind a gene expression experiment
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W168–W172, https://doi.org/10.1093/nar/gks573
DBD2BS: connecting a DNA-binding protein with its binding sites
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W173–W179, https://doi.org/10.1093/nar/gks564
Tags:
binding sites, dna, templates, complex, atom
3DTF: a web server for predicting transcription factor PWMs using 3D structure-based energy calculations
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W180–W185, https://doi.org/10.1093/nar/gks551
VIGOR extended to annotate genomes for additional 12 different viruses
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W186–W192, https://doi.org/10.1093/nar/gks528
Tags:
codon, terminator, genbank, genes, genome, viruses
jpHMM: recombination analysis in viruses with circular genomes such as the hepatitis B virus
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W193–W198, https://doi.org/10.1093/nar/gks414
AVPpred: collection and prediction of highly effective antiviral peptides
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W199–W204, https://doi.org/10.1093/nar/gks450
MFEprimer-2.0: a fast thermodynamics-based program for checking PCR primer specificity
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W205–W208, https://doi.org/10.1093/nar/gks552
RF-Cloning.org: an online tool for the design of restriction-free cloning projects
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W209–W213, https://doi.org/10.1093/nar/gks396
ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W214–W221, https://doi.org/10.1093/nar/gks435
MOLEonline 2.0: interactive web-based analysis of biomacromolecular channels
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W222–W227, https://doi.org/10.1093/nar/gks363
pKNOT v.2: the protein KNOT web server
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W228–W231, https://doi.org/10.1093/nar/gks592
CPred: a web server for predicting viable circular permutations in proteins
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W232–W237, https://doi.org/10.1093/nar/gks529
ConoDictor: a tool for prediction of conopeptide superfamilies
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W238–W241, https://doi.org/10.1093/nar/gks337
SPEER-SERVER: a web server for prediction of protein specificity determining sites
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W242–W248, https://doi.org/10.1093/nar/gks559
Tags:
amino acids, benchmarking, entropy, precision, heterogeneity
DR_bind: a web server for predicting DNA-binding residues from the protein structure based on electrostatics, evolution and geometry
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W249–W256, https://doi.org/10.1093/nar/gks481
Tags:
dna, electrostatics, protein structure, datasets, precision
BioShell Threader: protein homology detection based on sequence profiles and secondary structure profiles
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W257–W262, https://doi.org/10.1093/nar/gks555
MoNetFamily: a web server to infer homologous modules and module–module interaction networks in vertebrates
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W263–W270, https://doi.org/10.1093/nar/gks541
Tags:
human, mice, proton pump inhibitors, templates, vertebrates
FTMAP: extended protein mapping with user-selected probe molecules
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W271–W275, https://doi.org/10.1093/nar/gks441
Improvements in the protein identifier cross-reference service
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W276–W280, https://doi.org/10.1093/nar/gks338
Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W281–W287, https://doi.org/10.1093/nar/gks469
PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W288–W293, https://doi.org/10.1093/nar/gks419
GalaxyWEB server for protein structure prediction and refinement
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W294–W297, https://doi.org/10.1093/nar/gks493
Tags:
caspase-9, protein structure, templates
DSP: a protein shape string and its profile prediction server
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W298–W302, https://doi.org/10.1093/nar/gks361
CSA: comprehensive comparison of pairwise protein structure alignments
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W303–W309, https://doi.org/10.1093/nar/gks362
NMSim Web Server: integrated approach for normal mode-based geometric simulations of biologically relevant conformational transitions in proteins
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W310–W316, https://doi.org/10.1093/nar/gks478
Tags:
datasets, muscle rigidity, protein structure, radius, software
PredyFlexy: flexibility and local structure prediction from sequence
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W317–W322, https://doi.org/10.1093/nar/gks482
KoBaMIN: a knowledge-based minimization web server for protein structure refinement
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W323–W328, https://doi.org/10.1093/nar/gks376
Tags:
protein structure, software, caspase-8, casp7 gene, caspase-9
CMWeb: an interactive on-line tool for analysing residue–residue contacts and contact prediction methods
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W329–W333, https://doi.org/10.1093/nar/gks488
Super: a web server to rapidly screen superposable oligopeptide fragments from the protein data bank
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W334–W339, https://doi.org/10.1093/nar/gks436
Tags:
oligopeptides, protein data bank, filters, mathematics
SeqFIRE: a web application for automated extraction of indel regions and conserved blocks from protein multiple sequence alignments
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W340–W347, https://doi.org/10.1093/nar/gks561
Protein frustratometer: a tool to localize energetic frustration in protein molecules
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W348–W351, https://doi.org/10.1093/nar/gks447
Tags:
frustration, molecule
BioMe: biologically relevant metals
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W352–W357, https://doi.org/10.1093/nar/gks514
Tags:
coordination, metals, ions, ligands, rna
Monte Carlo simulations of peptide–membrane interactions with the MCPep web server
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W358–W363, https://doi.org/10.1093/nar/gks577
Tags:
peptides, tissue membrane, lipids, free energy, amino acids
iELM—a web server to explore short linear motif-mediated interactions
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W364–W369, https://doi.org/10.1093/nar/gks444
Transmembrane helix: simple or complex
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W370–W375, https://doi.org/10.1093/nar/gks379
ASEB: a web server for KAT-specific acetylation site prediction
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W376–W379, https://doi.org/10.1093/nar/gks437
SPRITE and ASSAM: web servers for side chain 3D-motif searching in protein structures
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W380–W386, https://doi.org/10.1093/nar/gks401
Tags:
amino acids, atom, graphical displays
PocketQuery: protein–protein interaction inhibitor starting points from protein–protein interaction structure
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W387–W392, https://doi.org/10.1093/nar/gks336
idTarget: a web server for identifying protein targets of small chemical molecules with robust scoring functions and a divide-and-conquer docking approach
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W393–W399, https://doi.org/10.1093/nar/gks496
Tags:
affinity, molecule, protein data bank, internet
PocketAnnotate: towards site-based function annotation
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W400–W408, https://doi.org/10.1093/nar/gks421
Tags:
binding sites, biochemistry, ligands, proline, protein structure
ZINCPharmer: pharmacophore search of the ZINC database
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W409–W414, https://doi.org/10.1093/nar/gks378
Tags:
ligands, zinc, molecular structure, drug discovery
Quantum.Ligand.Dock: protein–ligand docking with quantum entanglement refinement on a GPU system
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W415–W422, https://doi.org/10.1093/nar/gks515
Tags:
ligands, electrostatics, molecule
PepSite: prediction of peptide-binding sites from protein surfaces
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W423–W427, https://doi.org/10.1093/nar/gks398
PBSword: a web server for searching similar protein–protein binding sites
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W428–W434, https://doi.org/10.1093/nar/gks527
PSC: protein surface classification
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W435–W439, https://doi.org/10.1093/nar/gks495
Tags:
libraries, ligands, catheterization, solvents, funding
PRince: a web server for structural and physicochemical analysis of Protein-RNA interface
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W440–W444, https://doi.org/10.1093/nar/gks535
Tags:
biophysics, molecule, rna, software, solvents
dbCAN: a web resource for automated carbohydrate-active enzyme annotation
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W445–W451, https://doi.org/10.1093/nar/gks479
Tags:
biotechnology, carbohydrates, datasets, enzymes, genome
SIFT web server: predicting effects of amino acid substitutions on proteins
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W452–W457, https://doi.org/10.1093/nar/gks539
Tags:
amino acid substitution, datasets, dna, genome, sorting
GPSy: a cross-species gene prioritization system for conserved biological processes—application in male gamete development
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W458–W465, https://doi.org/10.1093/nar/gks380
Tags:
genes, germ cells, datasets
CombFunc: predicting protein function using heterogeneous data sources
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W466–W470, https://doi.org/10.1093/nar/gks489
COFACTOR: an accurate comparative algorithm for structure-based protein function annotation
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W471–W477, https://doi.org/10.1093/nar/gks372
Tags:
benchmarking, binding sites, caspase-9, community, enzymes
GeneCodis3: a non-redundant and modular enrichment analysis tool for functional genomics
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W478–W483, https://doi.org/10.1093/nar/gks402
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W484–W490, https://doi.org/10.1093/nar/gks458
KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W491–W497, https://doi.org/10.1093/nar/gks490
Tags:
carbon, genes, genome, glycolysis, metabolism
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W498–W504, https://doi.org/10.1093/nar/gks494
Tags:
micrornas
SteinerNet: a web server for integrating ‘omic’ data to discover hidden components of response pathways
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W505–W509, https://doi.org/10.1093/nar/gks445
Cscan: finding common regulators of a set of genes by using a collection of genome-wide ChIP-seq datasets
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W510–W515, https://doi.org/10.1093/nar/gks483
HomozygosityMapper2012—bridging the gap between homozygosity mapping and deep sequencing
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W516–W520, https://doi.org/10.1093/nar/gks487
Paratome: an online tool for systematic identification of antigen-binding regions in antibodies based on sequence or structure
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W521–W524, https://doi.org/10.1093/nar/gks480
Immune epitope database analysis resource
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W525–W530, https://doi.org/10.1093/nar/gks438
KOSMOS: a universal morph server for nucleic acids, proteins and their complexes
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W531–W536, https://doi.org/10.1093/nar/gks525
Tags:
atom, complex, dna, macromolecule, morphine
H++ 3.0: automating pK prediction and the preparation of biomolecular structures for atomistic molecular modeling and simulations
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W537–W541, https://doi.org/10.1093/nar/gks375
Tags:
amino acids, anatomy, regional, asparagine, atom, biophysics
RPF: a quality assessment tool for protein NMR structures
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W542–W546, https://doi.org/10.1093/nar/gks373
DichroMatch: a website for similarity searching of circular dichroism spectra
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W547–W552, https://doi.org/10.1093/nar/gks449
Cyber-T web server: differential analysis of high-throughput data
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W553–W559, https://doi.org/10.1093/nar/gks420
Tags:
bioinformatics, datasets, diagnosis, dna microarrays, genes
O-miner: an integrative platform for automated analysis and mining of -omics data
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W560–W568, https://doi.org/10.1093/nar/gks432
Tags:
bioinformatics, genome, genomics, heterogeneity, mining
EvolView, an online tool for visualizing, annotating and managing phylogenetic trees
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W569–W572, https://doi.org/10.1093/nar/gks576
T-REX: a web server for inferring, validating and visualizing phylogenetic trees and networks
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W573–W579, https://doi.org/10.1093/nar/gks485
FastML: a web server for probabilistic reconstruction of ancestral sequences
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W580–W584, https://doi.org/10.1093/nar/gks498
GeneView: a comprehensive semantic search engine for PubMed
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W585–W591, https://doi.org/10.1093/nar/gks563
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W592–W596, https://doi.org/10.1093/nar/gks448
ExPASy: SIB bioinformatics resource portal
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W597–W603, https://doi.org/10.1093/nar/gks400
Web Services
RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W604–W608, https://doi.org/10.1093/nar/gks562
CellBase, a comprehensive collection of RESTful web services for retrieving relevant biological information from heterogeneous sources
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W609–W614, https://doi.org/10.1093/nar/gks575
Tags:
heterogeneity, technology, genome, systems biology
Stand Alone Programs
Savant Genome Browser 2: visualization and analysis for population-scale genomics
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W615–W621, https://doi.org/10.1093/nar/gks427
RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W622–W627, https://doi.org/10.1093/nar/gks540
Tags:
rna, software, gene expression, bioinformatics, datasets
BiForce Toolbox: powerful high-throughput computational analysis of gene–gene interactions in genome-wide association studies
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages W628–W632, https://doi.org/10.1093/nar/gks550
Front-Matter/Back-Matter
Nucleic Acids Research: VOLUME 40 WEB SERVER ISSUE JULY 1, 2012
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages i, https://doi.org/10.1093/nar/gks114
Nucleic Acids Research - Editorial Board
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages ii, https://doi.org/10.1093/nar/gks092
Subscriptions
Nucleic Acids Research, Volume 40, Issue W1, 1 July 2012, Pages iii, https://doi.org/10.1093/nar/gks136
