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Pan Liao, Qin-Fang Chen, Mee-Len Chye, Transgenic Arabidopsis Flowers Overexpressing Acyl-CoA-Binding Protein ACBP6 are Freezing Tolerant, Plant and Cell Physiology, Volume 55, Issue 6, June 2014, Pages 1055–1071, https://doi.org/10.1093/pcp/pcu037
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Abstract
Low temperature stress adversely affects plant growth. It has been shown that the overexpression of ACYL-COENZYME A-BINDING PROTEIN6 (ACBP6) resulted in enhanced freezing tolerance in seedlings and rosettes accompanied by a decrease in phosphatidylcholine (PC), an increase in phosphatidic acid (PA) and an up-regulation of PHOSPHOLIPASE Dδ(PLDδ) in the absence of COLD-RESPONSIVE (COR)-related gene induction. Unlike rosettes, ACBP6-overexpressor (OE) flowers showed elevations in PC and monogalactosyldiacylglycerol (MGDG) accompanied by a decline in PA. The increase in PC species corresponded to a decline in specific PAs. To better understand such differences, the expression of PC-, MGDG-, proline-, ABA- and COR-related genes, and their transcription factors [C-repeat binding factors (CBFs), INDUCER OF CBF EXPRESSION1 (ICE1) and MYB15] was analyzed by quantitative real-time PCR (qRT-PCR). ACBP6-conferred freezing-tolerant flowers showed induction of COR-related genes, CBF genes and ICE1, PC-related genes (PLDδ, CK, CK-LIKE1, CK-LIKE2, CCT1, CCT2, LPCAT1, PLA2α, PAT-PLA-IIβ, PAT-PLA-IIIα, PAT-PLA-IIIδ and PLDζ2), MGDG-related genes (MGD genes and SFR2) and ABA-responsive genes. In contrast, ACBP6-conferred freezing-tolerant rosettes were down-regulated in COR-related genes, CBF1, PC-related genes (PEAMT1, PEAMT2, PEAMT3, CK1, CCT1, CCT2, PLA2α, PAT-PLA-IIIδ and PLDζ2), MGDG-related genes (MGD2, MGD3 and SFR2) and some ABA-responsive genes including KIN1 and KIN2. These results suggest that the mechanism in ACBP6-conferred freezing tolerance varies in different organs.
Introduction
Low temperature stress including chilling (<20°C) and freezing (<0°C) adversely affects plant growth, development and agricultural productivity (Li et al. 2004, Chinnusamy et al. 2007). Plants including Arabidopsis adapt to survive freezing when pre-exposed to low temperature, i.e. during cold acclimation (Moellering et al. 2010). Changes in gene expression, metabolism and remodeling of tissue and cell structures occur as the plant responds (Chinnusamy et al. 2007, Moellering et al. 2010).
The identification of genes and transcription factors that enhance cold and freezing tolerance provides a first step towards developing potential applications in agriculture (Thomashow 1999, Chinnusamy et al. 2007, Zhou et al. 2011, Theocharis et al. 2012). Manipulation of the C-repeat binding factor (CBF)-dependent signaling pathway allowed plants to attain freezing tolerance (Gilmour et al. 1998, Gilmour et al. 2000). Transcription factors CBF1, CBF2 and CBF3 up-regulate many COLD-RESPONSIVE (COR) genes such as COR6.6/KIN2, COR15a, COR47 and LTI78 by binding to the C-repeat (CRT)/dehydration-responsive (DRE) element (Gilmour et al. 1998, Thomashow 1999, Gilmour et al. 2000, Thomashow 2010), and enhanced freezing tolerance was conferred on transgenic Arabidopsis overexpressing CBF1, CBF2 or CBF3 (Jaglo-Ottosen et al. 1998, Liu et al. 1998, Kasuga et al. 1999, Gilmour et al. 2004).
In contrast, CBF4 was not responsive to cold but was induced by ABA, a phytohormone which plays an important role in adaptation to drought (Haake et al. 2002, Knight et al. 2004). CBF1, CBF2 and CBF3 were also up-regulated by ABA but less so than by cold (Knight et al. 2004). Hence, an ABA-inducible signaling pathway triggered by cold-inducible CBFs may still activate CRTs (Gilmour and Thomashow, 1991, Knight et al. 2004). The ectopic expression of ABA-INSENSITIVE3 (ABI3) resulted in freezing tolerance in Arabidopsis (Tamminen et al. 2001). The MYC-type basic helix–loop–helix transcription factor INDUCER OF CBF EXPRESSION1 (ICE1) positively regulates CBF3, and transgenic Arabidopsis overexpressing ICE1 were freezing tolerant (Chinnusamy et al. 2003).
Plants accumulate osmolytes including soluble sugars and proline during cold acclimation to protect membranes against freezing injury (Strauss and Hauser 1986, Anchordoguy et al. 1987, Li et al. 2004). Genes related to lipid metabolism, particularly those associated with stabilizing membranes, can protect against low temperature (Li et al. 2004, Devaiah et al. 2006, Chen et al. 2008, Du et al. 2010, Moellering et al. 2010). Upon freezing, phospholipase Dα (PLDα)-deficient Arabidopsis showed an increase in phosphatidylcholine (PC) and reduction in phosphatidic acid (PA), stabilizing the membrane bilayer structure and resulting in freezing tolerance (Welti et al. 2002). On the other hand, transgenic Arabidopsis overexpressing plasma membrane-associated PLDδ accumulated PA on freezing treatment and achieved tolerance, while the PLDδ knockout mutant became more sensitive. Thus, PLDδ-regulated PA production at the plasma membrane altered the freezing response but PLDδ overexpression did not affect COR (COR47 and LTI78) gene expression or soluble sugar and proline contents (Li et al. 2004). Unlike COR47, SENSITIVE TO FREEZING2 (SFR2) is constitutively expressed and is not cold inducible (Thorlby et al. 2004). SFR2 stabilizes the outer chloroplast membrane, enhancing freezing tolerance (Moellering et al. 2010). SFR2 encodes a galactolipid galactosyltransferase (GGGT), which catalyzes the transgalactosidation of monogalactosyldiacylglycerol (MGDG) to di-, tri- and tetragalactosyldiacylglycerol (DGDG, TGDG and TeDG, respectively), concomitantly generating diacylglycerol (DAG) (Benning and Ohta 2005). Upon freezing, DAG is further converted to triacylglycerol (TAG), a non-polar lipid not normally present in membranes (Moellering et al. 2010).
Six isogenes encode acyl-CoA-binding proteins (ACBPs) in Arabidopsis (Xiao and Chye 2009, Xiao and Chye 2011). ACBPs are involved in lipid metabolism, plant development and stress responses to heavy metals, oxidation and drought (Xiao and Chye, 2009, Xiao and Chye 2011, Du et al. 2013a, Du et al. 2013b). ACBP1 and ACBP6 have been shown to be associated with freezing through different mechanisms (Chen et al. 2008, Du et al. 2010). The acbp1 mutant displayed enhanced freezing tolerance accompanied by an increase in PC and a decrease in PA, while seedlings and rosettes of ACBP1-overexpressors (OEs) showed greater freezing sensitivity accompanied by a reduction in PC and a gain in PA (Du et al. 2010). Loss of ACBP1 function was related to down-regulation of PLDα1 and up-regulation of PLDδ, but the expression of COR6.6 and COR47, and soluble sugar and proline contents were not affected (Du et al. 2010). In contrast, the acbp6 mutant was freezing sensitive, Arabidopsis ACBP6-OE seedlings and rosettes were tolerant and the expression of PLDδ, but not that of the COR genes, was induced in ACBP6-OEs (Chen et al. 2008). Lipid profiling of ACBP6-OE rosettes post-freezing revealed a decline in PC, while PA increased in comparison to the wild type (WT) (Chen et al. 2008).
Many studies on freezing tolerance utilized Arabidopsis seedlings and rosettes which represent the vegetative stages, but flowers comprising the reproductive stage have seldom been tested. An understanding of freezing tolerance in flowers will enable us to better direct strategies in floral protection in floriculture. Previous studies have revealed that the up-regulation of many COR genes in Arabidopsis leaf tissues after cold stress is not conserved in pollen (Lee and Lee 2003). Also, 86% of the genes that show cold induction are not conserved between Arabidopsis leaves and roots (Kreps et al. 2002). These results indicate that the transcriptional networks in cold regulation differ amongst various organs (Chinnusamy et al. 2007). As ACBP6 is expressed in both leaves and flowers (Chen et al. 2008), we addressed herein ACBP6 function during freezing stress in these organs of ACBP6-OE plants, and report observations on their differential gene regulation, and changes in lipid and proline.
Results
Flowers of ACBP6-OEs are freezing tolerant
Flowers of ACBP6-OEs (OE-3 and OE-5) and the WT were subjected to freezing treatment in this study as shown in Fig. 1. Non-acclimated (NA) flowers were harvested from 5-week-old Arabidopsis plants grown at 23°C. NA flowers were treated at 4°C for 3 d to obtain cold-acclimated (CA) flowers. CA flowers were subjected to freezing treatment (–7°C for 1 h) to obtain freeze-treated (F) flowers. F flowers were left to recover at 4°C for 12 h, to yield flowers after recovery (R).
Flowchart to illustrate the treatments carried out on flowers used in this study. Non-acclimated (NA) flowers were harvested from 5-week-old Arabidopsis plants grown at 23°C. These flowers were treated at 4°C for 3 d to obtain cold-acclimated (CA) flowers. CA flowers were subjected to freezing treatment (–7°C for 1 h) to obtain freeze-treated (F) flowers. F flowers were left to recover at 4°C for 12 h, to yield flowers after recovery (R). Color codes used: NA (gray), CA (pink), F (blue) and R (green). NA, CA, F and R samples were used for lipid analysis (Table 1; Supplementary Tables S1, Supplementary Data,Supplementary Data; Fig. 3), qRT-PCR (Figs. 4–8, 10; Supplementary Figs. S1–S7), measurement of soluble sugar and proline contents (Figs. 9,10) and Northern blot analysis (Fig. 9).
There were no differences in phenotype between NA and CA WT Arabidopsis thaliana (Col-0) and ACBP6-OE flowers. After freezing (–7°C) treatment followed by a 7 d recovery, OE-3 and OE-5 flowers showed better tolerance and the percentage of intact OE flowers after freezing was significantly (P < 0.01) higher (82.6% and 89.6%, respectively) than the WT (54.5%) (Fig. 2). The results revealed that the overexpression of ACBP6 enhanced freezing tolerance of transgenic Arabidopsis flowers.
Flowers of ACBP6-OEs are freezing tolerant. (A) Representative flowers after freezing treatment followed by a 7 d post-freezing recovery at 4°C. Representative intact flowers are marked with a red line. Scale bar = 0.1 cm. (B) Percentage of intact flowers after freezing treatment followed by a 7 d post-freezing recovery at 4°C. The red column represents the percentage of intact flowers. Asterisks indicate significant differences from the WT (**P < 0.01). Values are means ± SD, n = 3 (30 flowers per group for each line were tested and the experiment was repeated twice).
Changes in lipid molecular species of ACBP6-OE flowers after freezing treatment
Except for a significant (P < 0.05) increase in PA in the ACBP6-OEs (OE-3 and OE-5) compared with the WT (Table 1), lipid profiling showed no other significant changes in the total amounts of PC, digalactosyldiacylglycerol (DGDG), MGDG, phosphatidylglycerol (PG), phosphatidylethanolamine (PE), phosphatidylinositol (PI) and phosphatidylserine (PS) between the NA ACBP6-OE and WT flowers. However, freeze-treated (F) ACBP6-OE flowers accumulated less PA than the WT (Table 1). Although this difference in PA content was not significant, the total PA content increased 2.7-fold in the WT in contrast to 1.6-fold in OE-3 and 2.0-fold in OE-5 (Table 1). Therefore, flowers of OE-3 and OE-5 accumulated 29% and 18% less PA than the WT, respectively (Table 1). In particular, 34:6 PA and 36:5 PA in the ACBP6-OEs were significantly (P < 0.05) lower than the WT (Supplementary Table S1). Also, 34:4 PA, 34:3 PA, 34:2 PA, 36:6 PA and 36:4 PA in the ACBP6-OEs were lower than the WT (Supplementary Table S1).
Total amount of lipid in each head group class in flowers of non-acclimated and freeze-treated ACBP6-OEs and the WT
| Lipid class . | NA . | F . | ||||
|---|---|---|---|---|---|---|
| . | WT . | OE-3 . | OE-5 . | WT . | OE-3 . | OE-5 . |
| PC | 32.6 ± 2.29 | 37.6 ± 1.45 | 39.1 ± 3.78 | 17.6 ± 1.28 | 23.6 ± 1.40b | 22.0 ± 1.32b |
| PA | 0.86 ± 0.14 | 1.61 ± 0.18b | 1.19 ± 0.14b | 3.18 ± 0.74 | 2.25 ± 0.94 | 2.61 ± 0.26 |
| DGDG | 16.2 ± 0.56 | 17.1 ± 0.94 | 14.8 ± 1.62 | 11.2 ± 0.41 | 12.1 ± 0.57b | 11.9 ± 1.09 |
| MGDG | 66.2 ± 2.61 | 66.0 ± 4.48 | 64.6 ± 4.69 | 29.6 ± 1.33 | 39.6 ± 0.53b | 36.0 ± 2.95b |
| PG | 5.54 ± 0.22 | 6.00 ± 0.38 | 5.55 ± 0.52 | 3.19 ± 0.48 | 3.86 ± 0.23b | 3.79 ± 0.17b |
| PE | 13.7 ± 2.35 | 13.9 ± 0.56 | 12.0 ± 0.97 | 8.21 ± 0.54 | 10.3 ± 0.28b | 8.59 ± 0.34 |
| PI | 6.72 ± 0.46 | 7.90 ± 0.90 | 6.52 ± 0.79 | 4.95 ± 0.03 | 5.71 ± 0.45b | 5.60 ± 0.50b |
| PS | 0.84 ± 0.13 | 0.89 ± 0.26 | 0.78 ± 0.12 | 0.51 ± 0.08 | 0.44 ± 0.07 | 0.30 ± 0.03a |
| LysoPG | 0.06 ± 0.00 | 0.06 ± 0.02 | 0.09 ± 0.03 | 0.15 ± 0.06 | 0.10 ± 0.03 | 0.11 ± 0.02 |
| LysoPC | 0.21 ± 0.01 | 0.25 ± 0.02 | 0.26 ± 0.05 | 0.51 ± 0.03 | 0.32 ± 0.11a | 0.38 ± 0.06a |
| LysoPE | 0.21 ± 0.04 | 0.26 ± 0.03 | 0.26 ± 0.04 | 0.39 ± 0.04 | 0.33 ± 0.05 | 0.32 ± 0.01a |
| Lipid class . | NA . | F . | ||||
|---|---|---|---|---|---|---|
| . | WT . | OE-3 . | OE-5 . | WT . | OE-3 . | OE-5 . |
| PC | 32.6 ± 2.29 | 37.6 ± 1.45 | 39.1 ± 3.78 | 17.6 ± 1.28 | 23.6 ± 1.40b | 22.0 ± 1.32b |
| PA | 0.86 ± 0.14 | 1.61 ± 0.18b | 1.19 ± 0.14b | 3.18 ± 0.74 | 2.25 ± 0.94 | 2.61 ± 0.26 |
| DGDG | 16.2 ± 0.56 | 17.1 ± 0.94 | 14.8 ± 1.62 | 11.2 ± 0.41 | 12.1 ± 0.57b | 11.9 ± 1.09 |
| MGDG | 66.2 ± 2.61 | 66.0 ± 4.48 | 64.6 ± 4.69 | 29.6 ± 1.33 | 39.6 ± 0.53b | 36.0 ± 2.95b |
| PG | 5.54 ± 0.22 | 6.00 ± 0.38 | 5.55 ± 0.52 | 3.19 ± 0.48 | 3.86 ± 0.23b | 3.79 ± 0.17b |
| PE | 13.7 ± 2.35 | 13.9 ± 0.56 | 12.0 ± 0.97 | 8.21 ± 0.54 | 10.3 ± 0.28b | 8.59 ± 0.34 |
| PI | 6.72 ± 0.46 | 7.90 ± 0.90 | 6.52 ± 0.79 | 4.95 ± 0.03 | 5.71 ± 0.45b | 5.60 ± 0.50b |
| PS | 0.84 ± 0.13 | 0.89 ± 0.26 | 0.78 ± 0.12 | 0.51 ± 0.08 | 0.44 ± 0.07 | 0.30 ± 0.03a |
| LysoPG | 0.06 ± 0.00 | 0.06 ± 0.02 | 0.09 ± 0.03 | 0.15 ± 0.06 | 0.10 ± 0.03 | 0.11 ± 0.02 |
| LysoPC | 0.21 ± 0.01 | 0.25 ± 0.02 | 0.26 ± 0.05 | 0.51 ± 0.03 | 0.32 ± 0.11a | 0.38 ± 0.06a |
| LysoPE | 0.21 ± 0.04 | 0.26 ± 0.03 | 0.26 ± 0.04 | 0.39 ± 0.04 | 0.33 ± 0.05 | 0.32 ± 0.01a |
Non-acclimated (NA) and freeze-treated (F) samples were obtained as shown in Fig. 1.
Values are means ± SD (nmol mg–1 DW; n = 4); significant differences (P < 0.05) from the WT in the same experiment are shown in bold.
a Value lower than the WT in the same experiment (P < 0.05).
b Value higher than the WT in the same experiment (P < 0.05).
Total amount of lipid in each head group class in flowers of non-acclimated and freeze-treated ACBP6-OEs and the WT
| Lipid class . | NA . | F . | ||||
|---|---|---|---|---|---|---|
| . | WT . | OE-3 . | OE-5 . | WT . | OE-3 . | OE-5 . |
| PC | 32.6 ± 2.29 | 37.6 ± 1.45 | 39.1 ± 3.78 | 17.6 ± 1.28 | 23.6 ± 1.40b | 22.0 ± 1.32b |
| PA | 0.86 ± 0.14 | 1.61 ± 0.18b | 1.19 ± 0.14b | 3.18 ± 0.74 | 2.25 ± 0.94 | 2.61 ± 0.26 |
| DGDG | 16.2 ± 0.56 | 17.1 ± 0.94 | 14.8 ± 1.62 | 11.2 ± 0.41 | 12.1 ± 0.57b | 11.9 ± 1.09 |
| MGDG | 66.2 ± 2.61 | 66.0 ± 4.48 | 64.6 ± 4.69 | 29.6 ± 1.33 | 39.6 ± 0.53b | 36.0 ± 2.95b |
| PG | 5.54 ± 0.22 | 6.00 ± 0.38 | 5.55 ± 0.52 | 3.19 ± 0.48 | 3.86 ± 0.23b | 3.79 ± 0.17b |
| PE | 13.7 ± 2.35 | 13.9 ± 0.56 | 12.0 ± 0.97 | 8.21 ± 0.54 | 10.3 ± 0.28b | 8.59 ± 0.34 |
| PI | 6.72 ± 0.46 | 7.90 ± 0.90 | 6.52 ± 0.79 | 4.95 ± 0.03 | 5.71 ± 0.45b | 5.60 ± 0.50b |
| PS | 0.84 ± 0.13 | 0.89 ± 0.26 | 0.78 ± 0.12 | 0.51 ± 0.08 | 0.44 ± 0.07 | 0.30 ± 0.03a |
| LysoPG | 0.06 ± 0.00 | 0.06 ± 0.02 | 0.09 ± 0.03 | 0.15 ± 0.06 | 0.10 ± 0.03 | 0.11 ± 0.02 |
| LysoPC | 0.21 ± 0.01 | 0.25 ± 0.02 | 0.26 ± 0.05 | 0.51 ± 0.03 | 0.32 ± 0.11a | 0.38 ± 0.06a |
| LysoPE | 0.21 ± 0.04 | 0.26 ± 0.03 | 0.26 ± 0.04 | 0.39 ± 0.04 | 0.33 ± 0.05 | 0.32 ± 0.01a |
| Lipid class . | NA . | F . | ||||
|---|---|---|---|---|---|---|
| . | WT . | OE-3 . | OE-5 . | WT . | OE-3 . | OE-5 . |
| PC | 32.6 ± 2.29 | 37.6 ± 1.45 | 39.1 ± 3.78 | 17.6 ± 1.28 | 23.6 ± 1.40b | 22.0 ± 1.32b |
| PA | 0.86 ± 0.14 | 1.61 ± 0.18b | 1.19 ± 0.14b | 3.18 ± 0.74 | 2.25 ± 0.94 | 2.61 ± 0.26 |
| DGDG | 16.2 ± 0.56 | 17.1 ± 0.94 | 14.8 ± 1.62 | 11.2 ± 0.41 | 12.1 ± 0.57b | 11.9 ± 1.09 |
| MGDG | 66.2 ± 2.61 | 66.0 ± 4.48 | 64.6 ± 4.69 | 29.6 ± 1.33 | 39.6 ± 0.53b | 36.0 ± 2.95b |
| PG | 5.54 ± 0.22 | 6.00 ± 0.38 | 5.55 ± 0.52 | 3.19 ± 0.48 | 3.86 ± 0.23b | 3.79 ± 0.17b |
| PE | 13.7 ± 2.35 | 13.9 ± 0.56 | 12.0 ± 0.97 | 8.21 ± 0.54 | 10.3 ± 0.28b | 8.59 ± 0.34 |
| PI | 6.72 ± 0.46 | 7.90 ± 0.90 | 6.52 ± 0.79 | 4.95 ± 0.03 | 5.71 ± 0.45b | 5.60 ± 0.50b |
| PS | 0.84 ± 0.13 | 0.89 ± 0.26 | 0.78 ± 0.12 | 0.51 ± 0.08 | 0.44 ± 0.07 | 0.30 ± 0.03a |
| LysoPG | 0.06 ± 0.00 | 0.06 ± 0.02 | 0.09 ± 0.03 | 0.15 ± 0.06 | 0.10 ± 0.03 | 0.11 ± 0.02 |
| LysoPC | 0.21 ± 0.01 | 0.25 ± 0.02 | 0.26 ± 0.05 | 0.51 ± 0.03 | 0.32 ± 0.11a | 0.38 ± 0.06a |
| LysoPE | 0.21 ± 0.04 | 0.26 ± 0.03 | 0.26 ± 0.04 | 0.39 ± 0.04 | 0.33 ± 0.05 | 0.32 ± 0.01a |
Non-acclimated (NA) and freeze-treated (F) samples were obtained as shown in Fig. 1.
Values are means ± SD (nmol mg–1 DW; n = 4); significant differences (P < 0.05) from the WT in the same experiment are shown in bold.
a Value lower than the WT in the same experiment (P < 0.05).
b Value higher than the WT in the same experiment (P < 0.05).
In contrast, PC levels decreased by 36% in OE-3, 42% in OE-5 and 45% in WT flowers after freezing treatment (Table 1). OE-3 and OE-5 flowers accumulated 34% and 25% more PC than the WT, respectively (P < 0.05) (Table 1). The contents of several PC species including 34:4 PC, 34:3 PC, 34:2 PC, 36:6 PC, 36:5 PC, 36:4 PC, 36:3 PC, 36:2 PC, 38:5 PC and 38:4 PC were significantly (P < 0.05) higher than the WT (Supplementary Table S2).
Furthermore, MGDG was reduced in OE-3, OE-5 and WT flowers after freezing treatment. The total MGDG content declined by 55% in the WT, and by 40% and 44%, respectively, in OE-3 and OE-5 (Table 1). Thus, OE-3 and OE-5 flowers accumulated 34% and 21% more MGDG than the WT (P < 0.05) (Table 1). In particular, contents of 34:6 MGDG, 34:5 MGDG, 34:3 MGDG, 36:6 MGDG, 36:5 MGDG and 36:4 MGDG were significantly (P < 0.05) higher than the WT (Supplementary Table S3).
A comparison of the total lipid content of flowers was made between the ACBP6-OEs and the WT before and after freezing treatment. Before freezing treatment, there were no significant differences between them (Fig. 3A). After freezing treatment, the total lipid content of ACBP6-OE and WT flowers declined by 37% (OE-3), 37% (OE-5) and 46% (WT) (P < 0.05) (Fig. 3A). Accordingly, the total lipids of OE-3 and OE-5 flowers were 20% and 15% higher than the WT (P < 0.05) (Fig. 3A).
Freezing-induced changes in floral lipids of Arabidopsis WT and ACBP6-OEs. Non-acclimated (NA) and freeze-treated (F) samples were obtained as shown in Fig. 1. The white bar represents the WT, and the black bars represent OE-3 and OE-5. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the F WT (P < 0.05). H, value higher than the WT (P < 0.05); L, value lower than the WT (P < 0.05). Values of total lipids are means ± SD (n = 4).
Decreases in the ratio of PA to PC have been reported to enhance membrane stability and improve freezing tolerance (Welti et al. 2002, Li et al. 2008, Du et al. 2010). Freezing-tolerant PLDα-deficient plants and ACBP1-deficient plants demonstrated a decrease in the ratio of PA to PC (Welti et al. 2002, Du et al. 2010). Hence, when the ratio of PA to PC was compared after freezing treatment, WT flowers showed a 5.8-fold increase, while OE-3 and OE-5 increased 2.1- and 3.1-fold, respectively, in comparison with the NA WT (Fig. 3B). The ratio of PA to PC in freeze-treated OE-3 and OE-5 was 45% and 37% lower, respectively, than the WT (P < 0.05) (Fig. 3B).
The expression of PC-related genes in ACBP6-OE flowers
To investigate the molecular mechanism of PC changes in NA, CA, ‘freeze-treated (F)’ and ‘after recovery (R)’ ACBP6-OE flowers, the expression of PC biosynthesis-related genes encoding phosphoethanolamine N-methyltransferase (PEAMT), choline kinase (CK), phosphorylcholine cytidylyltransferase (CCT) and lysophosphatidylcholine acyl-transferase (LPCAT) which reacylates lysophosphatidylcholine (LysoPC) to regenerate PC or deacylates PC to produce LysoPC (Lands, 1960), as well as PC degradation-related genes encoding phospholipase A (PLA) and PLD families were analyzed by quantitative real-time PCR (qRT-PCR). The results showed that the expression of PEAMT2 and PEAMT3 in ACBP6-OEs significantly (P < 0.05) decreased in comparison with the NA WT, the expression of PEAMT1, PEAMT2 and PEAMT3 in both the WT and ACBP6-OEs decreased after cold acclimation, freezing and recovery, while there were no differences in PEAMT1, PEAMT2 and PEAMT3 expression between ACBP6-OEs and the WT after cold acclimation, freezing and recovery (Fig. 4), suggesting that PC accumulation in ACBP6-OE flowers after freezing did not arise from up-regulation of PEAMT expression. CK encodes a choline kinase, catalyzing the first committed step in the choline pathway (Tasseva et al. 2004) in PC biosynthesis. The expression of CK1 and CK-LIKE2 in ACBP6-OE flowers was significantly (P < 0.05) higher than the WT after cold acclimation, freezing and recovery (Fig. 4). CK-LIKE1 expression was also significantly (P < 0.05) higher than the corresponding WT after freezing and recovery (Fig. 4). CCT1 and CCT2 are considered to affect PC biosynthesis substantially (Wang et al. 2012) and the expression of CCT1 was significantly (P < 0.05) higher than the WT after cold acclimation and recovery, respectively, and CCT2 expression in ACBP6-OE flowers was significantly (P < 0.05) higher than the WT after cold acclimation, freezing and recovery, respectively (Fig. 4). The expression of LPCAT1 in ACBP6-OE flowers was significantly (P < 0.05) higher than the WT after cold acclimation and recovery (Fig. 4). These results imply that ACBP6-conferred freezing tolerance in flowers is related to an increased expression of CK, CCT and LPCAT, but not PEAMT.
Expression of PC biosynthesis-related genes in flowers before and after freezing treatment. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT; c indicates a significant difference in comparison with the F WT; d indicates a significant difference in comparison with the R WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3).
With respect to PC degradation genes, PLA family members including PLA2α and the patatin-like PLA (PAT-PLA-IIβ, PAT-PLA-IIIα and PAT-PLA-IIIδ), and PLD family members such as PLDδ, PLDζ2 and PLDα1 were selected (Wang et al. 2012). PLA2α expression in ACBP6-OE flowers was lower than the NA WT, but higher than the corresponding WT after cold acclimation and recovery (Fig. 5). The expression of PAT-PLA-IIβ in ACBP6-OE flowers was lower than the NA WT, but higher than the corresponding WT after cold acclimation and recovery. PAT-PLA-IIIα was more highly expressed in ACBP6-OEs than the WT after freezing (Fig. 5). The expression of PAT-PLA-IIIδ in ACBP6-OE flowers was lower than the NA WT, but higher than the WT after freezing (Fig. 5). The expression of PLDδ in ACBP6-OE flowers was significantly (P < 0.05) higher than the corresponding WT after cold acclimation and recovery (Fig. 5). PLDζ2 showed up-regulation only after cold acclimation in ACBP6-OEs (Fig. 5). The expression of PLDα1 in OE-3 and OE-5 was lower than the NA WT, but was higher than the WT after cold acclimation and freezing (Fig. 5). These results indicate that not only PLDδ, but also other PC degradation-related genes such as PLA2α, PAT-PLA-IIβ, PAT-PLA-IIIα, PAT-PLA-IIIδ, PLDζ2 and PLDα1 were up-regulated in ACBP6-OE flowers after cold acclimation and freezing.
Expression of PC degradation-related genes in flowers before and after freezing treatment. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT; c indicates a significant difference in comparison with the F WT; d indicates a significant difference in comparison with the R WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3).
The expression of MGDG-related genes in ACBP6-OE flowers
As significant changes in floral MGDG were also observed between the ACBP6-OEs and the WT after freezing treatment, the expression of MGDG-related genes encoding monogalactosyldiacylglycerol synthase1 (MGD1), MGD2, MGD3 and SFR2 was investigated. The results revealed that the expression of MGD1 and SFR2 was higher in the WT after cold acclimation, freezing and recovery than the NA WT, while the expression of MGD2 and MGD3 was lower in the WT after cold acclimation, freezing and/or recovery than the NA WT (Fig. 6). MGD1 mRNA in OE-3 and OE-5 flowers was significantly (P < 0.05) higher than the WT after cold acclimation, freezing and recovery, while MGD2 showed a slight increase in OE-3 and OE-5 after freezing, but was down-regulated after recovery (Fig. 6). MGD3 showed a significant (P < 0.05) increase in OE-3 and OE-5 after cold acclimation and freezing, and SFR2 displayed higher expression in OE-3 and OE-5 after cold acclimation and recovery (Fig. 6). Therefore, ACBP6-conferred freezing tolerance in flowers appeared to be associated with expression of MGDG-related genes.
Expression of MGDG-related genes in flowers before and after freezing treatment. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT; c indicates a significant difference in comparison with the F WT; d indicates a significant difference in comparison with the R WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3).
ACBP6-conferred freezing tolerance in flowers is related to COR gene expression
In ACBP6-OE rosettes, the expression of COR genes was no higher than the WT after cold acclimation, implying that ACBP6-conferred freezing tolerance in rosettes is not related to the induction of COR expression (Chen et al. 2008). To explore whether the expression of COR genes in OE-3 and OE-5 flowers behaves similarly, COR (COR6.6, COR47, LTI78 and COR15a) expression was analyzed by qRT-PCR. The results showed that COR6.6, COR47, LTI78 and COR15a mRNAs in OE-3 and OE-5 flowers were significantly lower than the NA WT, but increased significantly after cold acclimation, freezing or recovery (Fig. 7).
Expression of ACBP6 and cold-related genes in flowers before and after freezing treatment. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT; c indicates a significant difference in comparison with the F WT; d indicates a significant difference in comparison with the R WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3).
To address the participation of the COR pathway in ACBP6-conferred freezing tolerance in flowers, the expression of transcription factors (CBF1, CBF2 and CBF3) and the positive regulator of CBF3, ICE1, was analyzed. Results of qRT-PCR showed that the expression of CBF1, CBF2 and CBF3 in ACBP6-OEs was significantly higher than the WT after cold acclimation and freezing (Fig. 8). Correspondingly, the ICE1 mRNA was higher in OE-3 and OE-5 than the WT after cold acclimation, freezing and recovery (Fig. 8). These results confirm that ACBP6-conferred freezing tolerance in flowers is related to the COR pathway.
Expression of CBF genes, ICE1, MYB15 and ABA-related genes in flowers before and after freezing treatment. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT; c indicates a significant difference in comparison with the F WT; d indicates a significant difference in comparison with the R WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3).
When the expression of mRNA encoding MYB15, a nuclear factor that negatively regulates the expression of CBF genes (Chinnusamy et al. 2007), was measured, the results indicated that its expression in OE-3 and OE-5 flowers was lower than the NA WT, while there were no significant differences between ACBP6-OEs and WT after cold acclimation and freezing. MYB15 mRNA in OE-3 and OE-5 flowers was significantly higher than the WT after recovery (Fig. 8). These results suggested that ACBP6-conferred freezing tolerance in flowers is not associated with MYB15.
Expression of ABA-related genes in flowers before and after freezing
In contrast to CBF1, CBF2 and CBF3, which are up-regulated by cold and ABA, CBF4 is induced only by ABA. Furthermore, many genes including KIN1, KIN2 and RESPONSE TO DESICCATION29A (RD29A) are up-regulated by both cold and ABA (Wang et al. 1995, Xiong et al. 2002). Given the significant induction of COR6.6/KIN2 and RD29A in ACBP6-OE flowers after cold acclimation and freezing (Fig. 7), the role of ABA was subsequently investigated. Significant up-regulation of KIN1, CBF4 and ABA-INSENSITIVE 5 (ABI5) was also seen in ACBP6-OEs after cold acclimation and freezing, and 9-CIS-EPOXYCAROTENOID DIOXYGENASE3 (NCED3) showed higher expression in ACBP6-OE flowers after cold acclimation (Figs. 7, 8), suggesting that ACBP6-conferred freezing tolerance in flowers is associated with the ABA signaling pathway.
Measurement of soluble sugar and proline contents and the expression of proline-related genes in NA and CA rosettes
As the accumulation of soluble sugars and proline at low temperatures enhances freezing tolerance in Arabidopsis (Xin and Browse 1998, Rajashekar et al. 2006), the soluble sugar and proline contents of 5-week-old NA and CA WT and ACBP6-OE rosettes were compared. Both NA and CA ACBP6-OE rosettes showed significantly (P < 0.05) higher soluble sugar levels than the WT (Fig. 9A). Although lower values were observed in the acbp6 mutant, the Student’s t-test revealed that this result was not significant. After cold acclimation, the soluble sugar content in ACBP6-OE rosettes reached approximately 2-fold the WT level (Fig. 9A).
Changes in leaf soluble sugar and proline contents and expression of proline-related genes from non-acclimated (NA) and cold-acclimated (CA) 5-week-old plants. (A) Changes in soluble sugar content in NA and CA rosettes of the WT, the acbp6 mutant and ACBP6-OEs (OE-3 and OE-5). NA and CA leaf samples were obtained as shown in Fig. 1. Asterisks indicate a significant difference from the WT (P < 0.05). Values are means ± SD (n = 3) calculated from three independent experiments. (B) Proline content in NA and CA rosettes of the WT, the acbp6 mutant and ACBP6-OEs (OE-3 and OE-5). Asterisks indicate a significant difference from the WT (P < 0.05). Values are means ± SD (n = 3) from three independent experiments. (C) Northern blot analysis using digoxgenin-labeled P5CS, AtPOX and ACBP6 cDNA probes. Total RNA was isolated from NA and CA rosettes of the WT, acbp6 and ACBP6-OEs. Bottom panel: total RNA (30 µg per lane) stained with ethidium bromide.
When the proline content of 5-week-old NA and CA WT and ACBP6 rosettes of OE-3 and OE-5 were compared, both NA and CA ACBP6-OEs showed significantly (P < 0.05) higher amounts than the WT (Fig. 9B). The proline level in rosettes of OE-3 and OE-5 following cold acclimation was approximately 2-fold the WT level (Fig. 9B). Although the proline level in the acbp6 mutant was below that of the WT (Fig. 9B), the change was not deemed significant.
To further understand the mechanism of ACBP6-conferred freezing tolerance related to proline in rosettes, Northern blot analyses were carried out to detect the mRNAs encoding Δ1-pyrroline-5-carboxylate synthase (P5CS) in proline biosynthesis and the mRNA encoding a proline oxidase (AtPOX) in proline degradation. Consistent with greater accumulation of free proline in ACBP6-OE rosettes, P5CS mRNA was higher than the WT. In contrast, AtPOX mRNA was lower in ACBP6-OEs and the knockout mutant than the CA WT rosettes (Fig. 9C). These observations indicated that the accumulation of soluble sugars and proline may enhance freezing tolerance in the ACBP6-OE rosettes, resembling other freeze-tolerant plants.
Expression of proline-related genes and metabolite changes of soluble sugars and proline during cold acclimation in ACBP6-OE flowers
In order to address whether proline in ACBP6-OE flowers after cold acclimation was affected, qRT-PCR was subsequently conducted to analyze P5CS and AtPOX expression. In ACBP6-OE flowers, P5CS mRNA was lower than NA WT, but higher than CA WT (Fig. 10A). In contrast, AtPOX expression in OEs was lower than both NA and CA WT flowers (Fig. 10B). However, no differences in P5CS and AtPOX expression were evident between OEs and the WT after freezing and recovery (Fig. 10A, B).
Expression of proline-related genes in flowers before and after freezing treatment and changes in soluble sugar and proline contents from non-acclimated and cold-acclimated flowers. (A and B) Expression of P5CS and AtPOX in flowers by qRT-PCR. Total RNA was extracted from non-acclimated (NA), cold-acclimated (CA), freeze-treated (F) and after recovery (R) flowers of WT, OE-3 and OE-5. NA, CA, F and R samples were obtained as shown in Fig. 1. a indicates a significant difference in comparison with the NA WT; b indicates a significant difference in comparison with the CA WT. H, value higher than the control (P < 0.05); L, value lower than the control (P < 0.05). Values are means ± SD (n = 3). (C) Changes in soluble sugar content in NA and CA flowers of WT and ACBP6-OEs (OE-3 and OE-5). Asterisks indicate a significant difference from the WT (P < 0.05). Values are means ± SD (n = 3) calculated from three independent experiments. (D) Differences in proline content in NA and CA flowers of WT and ACBP6-OEs (OE-3 and OE-5). Asterisks indicate a significant difference from the WT (P < 0.05). Values are means ± SD (n = 3) from three independent experiments.
The content of soluble sugars and proline in ACBP6-OE flowers was further analyzed at NA and CA stages to test whether solutes play similar roles in ACBP6-OE rosettes and flowers during cold acclimation. Similar to rosettes (Fig. 9A), NA ACBP6-OE flowers showed significantly (P < 0.05) higher soluble sugars than the NA WT (Fig. 10C). In contrast, there was no significant difference in soluble sugars between the CA WT and the CA ACBP6-OE flowers (Fig. 10C). When the proline contents of the NA and the CA WT and ACBP6-OE flowers were compared, both the NA and CA ACBP6-OEs showed significantly (P < 0.05) lower amounts than their corresponding WT (Fig. 10D). The proline level in the CA flowers of OE-3 and OE-5 (following cold acclimation) was approximately 50% of the CA WT level (Fig. 10D). The decrease in proline in the NA flowers of OE-3 and OE-5 was consistent with their lower expression of P5CS (Fig. 10A, D). However, the decrease in proline in the CA flowers of OE-3 and OE-5 appears inconsistent with their higher expression of P5CS and lower expression of AtPOX (Fig. 10A, D).
Gene expression in ACBP6-OE rosettes before and after freezing
Differences in lipid changes after freezing were addressed using qRT–PCR to check the expression of PC-, MGDG-, proline-, ABA- and COR-related genes in rosettes subjected to non-acclimation, cold acclimation, freezing and recovery.
For PC biosynthesis-related genes, PEAMT1 showed lower expression in rosettes of ACBP6-OEs after cold acclimation, in comparison with the CA WT; PEAMT2 displayed lower expression after cold acclimation, freezing and recovery, and PEAMT3 showed lower expression after cold acclimation and freezing (Supplementary Fig. S1). No differences in the expression of PEAMT1, PEAMT2 and PEAMT3 were observed between ACBP6-OE and WT flowers during cold acclimation, freezing and recovery (Fig. 4), indicating that PEAMT1, PEAMT2 and PEAMT3 maintain the PC content in ACBP6-OE flowers after freezing, while decreased expression of PEAMT1, PEAMT2 and PEAMT3 may be attributed to a decrease in the PC content in the ACBP6-OE rosettes after freezing. Similarly, the PC biosynthesis-related genes (CK1, CCT1 and CCT2) showed decreased expression in ACBP6-OE rosettes after cold acclimation, but CK1, CK-LIKE1 and CCT1 displayed increased expression after freezing (Supplementary Fig. S1). No significant differences in the expression of CK-LIKE2 and LPCAT1 were observed between ACBP6-OE and WT rosettes at any stage (Supplementary Fig. S1). These results suggested that the decrease in PC content in ACBP6-OE rosettes after freezing was related to the down-regulation of PEAMT1, PEAMT2, PEAMT3, CK1, CCT1 and CCT2.
For PC degradation-related genes, the expression of PLA2α and PAT-PLA-IIIδ in ACBP6-OE rosettes was lower than the WT after cold acclimation and freezing (Supplementary Fig. S2). PLDζ2 displayed lower expression in ACBP6-OE rosettes after cold acclimation, but higher expression after recovery (Supplementary Fig. S2). Other genes including PAT-PLA-IIβ and PAT-PLA-IIIα did not show any significant differences between ACBP6-OE and WT rosettes at any stage (Supplementary Fig. S2). These results implied that the change in PC content in ACBP6-OE rosettes after freezing is related to the down-regulation of PLA2α, PAT-PLA-IIIδ and PLDζ2. In contrast to the up-regulation of several MGDG-related genes in ACBP6-OE flowers after cold acclimation and freezing (Fig. 6), MGD2, MGD3 and SFR2 expression declined in ACBP6-OE rosettes after cold acclimation and/or freezing (Supplementary Fig. S3).
COR-related genes (COR6.6, COR47, LTI78 and COR15a) showed higher expression in ACBP6-OE flowers than the WT after cold acclimation, freezing and recovery (Fig. 7). However, the expression of COR6.6, COR47, LTI78 and COR15a in ACBP6-OE rosettes was significantly lower than the WT after cold acclimation and/or freezing (Supplementary Fig. S4), consistent with the results of Northern blot analysis (Chen et al. 2008). Similarly, the expression of CBF1 and CBF2 in ACBP6-OE flowers was higher than the WT after cold acclimation and freezing (Fig. 8), while the expression of CBF1 and CBF2 in ACBP6-OE rosettes was lower than the WT after cold acclimation and recovery (Supplementary Fig. S5). Correspondingly, the expression of the negative regulator of CBFs (MYB15) in ACBP6-OE rosettes was higher than the WT after freezing and recovery (Supplementary Fig. S5). CBF3 and ICE1 showed increased expression after cold acclimation and recovery but showed no significant differences after freezing in ACBP6-OE rosettes (Supplementary Fig. S5). These results confirmed our previous finding that unlike flowers, ACBP6-conferred freezing tolerance in rosettes is independent of COR induction, suggesting that ACBP6-conferred freezing tolerance varied in different organs.
For ABA-responsive genes, inconsistent up-regulation of the expression of KIN1, KIN2, CBF4, ABI5 and NCED3 was observed in ACBP6-OE rosettes at different stages (Supplementary Fig. S4 for KIN1 and KIN2 and Supplementary Fig. S5 for CBF4, ABI5 and NCED3). KIN1 and KIN2 showed decreased expression in ACBP6-OE rosettes after cold acclimation and freezing (Supplementary Fig. S4), CBF4 displayed increased expression after cold acclimation and decreased expression after freezing, while ABI5 showed decreased expression after cold acclimation and increased expression after freezing (Supplementary Fig. S5). However, NCED3 displayed higher expression in ACBP6-OE rosettes after cold acclimation and recovery (Supplementary Fig. S5). These inconsistencies in up-regulation of ABA-responsive genes between rosettes and flowers suggested that ACBP6-conferred freezing tolerance may differ between various plant organs.
Discussion
Phenotypic differences between ACBP6-OE and WT flowers arise after freezing treatment
In this study, no phenotypic differences in seedlings, rosettes and flowers were observed under normal growth conditions amongst ACBP6-OEs, the acbp6 mutant and the WT. Earlier, Chen et al. (2008) had shown that there were no differences in phenotype or in lipid content between the acbp6 mutant and WT rosettes under normal conditions and that the expression of ACBP6 in WT plants was only induced by cold treatment but not by any other treatments such as high salt and a fungal elicitor (arachidonic acid) (Chen et al. 2008). Lack of induction with high salt deduced from Northern blot analysis (Chen et al. 2008) was consistent with microarray data analysis (www.weigelworld.org/resources/microarray) on ACBP6 (At1g31812) expresssion. Taken together, these observations suggest that the phenotypic differences between ACBP6-OE and WT flowers we observed herein arose from freezing treatment.
Differences between ACBP6-OE rosettes and flowers in freezing stress
We report that ACBP6-OEs showed enhanced freezing tolerance in flowers coinciding with PC and MGDG accumulation and PA reduction (Table 1). ACBP6-mediated freezing tolerance in rosettes was correlated with an increase in PLDδ, but not COR gene expression (Chen et al. 2008), while ACBP6-conferred freezing tolerance in flowers was related to the induction of COR-related genes, CBF genes and ICE1, but not MYB15 (Figs. 7, 8). Furthermore, ACBP6-mediated freezing tolerance in flowers was associated not only with elevated PLDδ expression, but also with that of other PC-related genes including CK, CK-LIKE1, CK-LIKE2, CCT1, CCT2, LPCAT1, PLA2α, PAT-PLA-IIβ, PAT-PLA-IIIα, PAT-PLA-IIIδ and PLDζ2 (Figs. 4, 5). Additionally, ACBP6-conferred freezing tolerance in flowers was affiliated with the up-regulation of ABA-related genes and MGDG-related genes such as MGD1, MGD3 and SFR2 (Fig. 6). P5CS and AtPOX expression in CA ACBP6-OE flowers showed a similar trend to that in CA rosettes (Figs. 9, 10). In contrast to CA OE rosettes that showed an increase in proline, the proline content declined in the CA OE flowers, which appears inconsistent with the higher expression of P5CS and lower expression of AtPOX (Fig. 10A, D). Such a disparity between the proline content and P5CS mRNA level has also been previously observed in an Arabidopsis mutant lacking HISTIDINE KINASE1 and this was attributed to post-transcriptional regulation of proline accumulation by P5CS (Kumar et al. 2013). These results imply that ACBP6-conferred freezing tolerance in flowers may not necessarily be dependent on proline accumulation, and proline seems to play a different role in CA ACBP6-OE rosettes and flowers, although proline-related genes did show similar changes in both organs (Figs. 9, 10).
Comparison of the lipid content and gene expression between WT flowers and rosettes after freezing
A comparison of the lipid content and gene expression between WT flowers and rosettes was carried out after freezing to address any variation between them. The results showed similar changes in the content of most lipids in WT flowers and rosettes. The PC, DGDG, MGDG, PE and PS content in flowers (Table 1) and rosettes (Chen et al. 2008) decreased after cold acclimation and freezing, while PA, LysoPG, LysoPC and LysoPE increased after freezing, consistent with the results of Welti et al. (2002). When the expression of PC-, PA-, MGDG- and COR-related genes at different stages (NA, CA, F and R) in WT flowers and rosettes was tested, the results indicated that ACBP6 expression was up-regulated after cold acclimation and recovery in flowers (Supplementary Fig. S6A) and after cold acclimation in rosettes (Supplementary Fig. S6B). Correspondingly, the expression of some PC-, PA-, MGDG-, proline- and COR-related genes including PLDζ2, CCT2, CK1, COR6.6, COR47, LTI78, COR15a, KIN1 and NCED3 was up-regulated in both flowers and rosettes after cold acclimation and/or freezing and/or recovery (Figs. 4–8; Supplementary Figs. S1–S5).
However, differences in expression of some genes were evident between WT flowers and rosettes at various stages. For example, MGD1 expression slightly increased in flowers after cold acclimation, freezing and recovery, but greatly increased in rosettes after freezing and recovery (Supplementary Fig. S6A, Supplementary Data). SFR2 expression increased 2- to 3-fold in flowers after cold acclimation, freezing and recovery, while its expression was only slightly up-regulated in rosettes after cold acclimation but decreased after freezing and recovery (Supplementary Fig. S6A, Supplementary Data). Furthermore, the expression of cold-related TFs (CBF1, CBF2, CBF3, ICE1 and CBF4) dramatically increased in rosettes after cold acclimation and/or freezing and/or recovery (Supplementary Fig. S6B), but the expression of CBF1, CBF2, CBF3 and ICE1 decreased or showed no change in flowers after cold acclimation and freezing (Supplementary Fig. S6A). Slight increases in CBF3 expression in flowers after recovery, and in CBF4 expression after freezing and recovery were noted (Supplementary Fig. S6A). Differences for several PC biosynthesis-related genes were also observed. For instance, PEAMT1 expression decreased in flowers after cold acclimation, freezing and recovery, but its expression significantly increased in rosettes after cold acclimation and decreased after freezing and recovery (Supplementary Fig. S7A, Supplementary Data). CK-LIKE1 expression increased in flowers after cold acclimation, freezing and recovery but decreased in rosettes after cold acclimation, freezing and recovery (Supplementary Fig. S7A, Supplementary Data). Although CCT2 showed up-regulation in both flowers and rosettes after freezing and recovery, it displayed down-regulation in flowers after cold acclimation but showed the highest increase in rosettes after cold acclimation (Supplementary Fig. S7A, Supplementary Data). Furthermore, four PC degradation-related genes showed variation between WT flowers and rosettes after cold acclimation, freezing and recovery; PAT-PLA-IIβ, PAT-PLA-IIIα, PAT-PLA-IIIδ and PLA2α expression increased in WT rosettes (Supplementary Fig. S7B), but decreased in WT flowers during cold acclimation and/or freezing and/or recovery (Supplementary Fig. S7A). These results revealed that WT flowers and rosettes showed some similar responses in gene expression during cold acclimation, freezing and recovery and in lipid content in freeze-treated flowers, but differential gene expression between flowers and rosettes reinforces the finding that variation in the transcriptional networks for cold regulation occurs between these organs (Lee and Lee 2003, Chinnusamy et al. 2007).
Role of PC and PA in ACBP6-mediated freezing tolerance in flowers
Accumulation of diunsaturated PC species may cause a decrease in propensity for formation of the freeze-induced non-lamellar phase, thus promoting membrane stabilization (Thomashow 1999, Uemura et al. 2006). The yeast 10-kDa ACBP is known to regulate the expression of genes involved in stress responses and phospholipid and fatty acid synthesis (Feddersen et al. 2007). Rather similarly, Arabidopsis ACBP6-OE rosettes showed enhanced freezing tolerance by the up-regulation of PLDδ (Chen et al. 2008).
We also reported that ACBP6 binds PC but not PA or LysoPC (Chen et al. 2008), suggesting a close relationship between ACBP6 and PC. Consistently, our results herein revealed that ACBP6 overexpression in flowers enhanced freezing tolerance by up-regulating PC biosynthesis-related genes, resulting in significant accumulation of diunsaturated PC (34:4 PC, 34:3 PC, 34:2 PC, 36:6 PC, 36:5 PC, 36:4 PC, 36:3 PC, 36:2 PC, 38:5 PC and 38:4 PC) after freezing (Figs. 3, 4; Table 1; Supplementary Table S2), resembling changes in PC content of freezing-tolerant PLDα-deficient Arabidopsis (Welti et al. 2002) and acbp1 knockout mutant rosettes (Du et al. 2010). ACBP6 overexpression may allow greater PC binding and accumulation in ACBP6-OE flowers. The PA content in ACBP6-OE flowers was significantly higher than the WT before treatment, but was lower after freezing, albeit without significant variation (Table 1). As accumulation of freeze-induced PA is detrimental to cell membranes by promoting the formation of the non-lamellar phase (Li et al. 2008), PA reduction in ACBP6-OE flowers probably enhanced membrane stability and freezing tolerance.
Role of ACBP6 in LPCAT1-mediated exchange between intracellular acyl-CoA and PC pools in flowers
Arabidopsis ACBP6 binds acyl-CoA esters in vitro, protects acyl-CoAs from degradation by microsomal acyl-hydrolases (Engeseth et al. 1996) and also binds PC (Chen et al. 2008). Yurchenko et al. (2009) reported that the recombinant 10-kDa ACBP from Brassica napus (BnACBP) binds acyl-CoA esters in vitro and enhances acyl exchange between acyl-CoA and PC catalyzed by LPCAT by promoting the incorporation of 18:1-CoA (Yurchenko and Weselake, 2011). The up-regulation of LPCAT1 in ACBP6-OE flowers after cold acclimation and recovery (Fig. 4) and accumulation of PC in ACBP6-OE flowers after freezing (Table 1) again implied a role for ACBP6 in LPCAT1-mediated maintenance of intracellular acyl-CoA and PC pools.
It was observed that PC degradation-related genes (PLAs and PLDs) were up-regulated in the flowers of ACBP-OEs after cold acclimation and freezing (Fig. 5), but the PC content had increased or was maintained at higher levels than the WT at the same stage (Table 1). Several possible reasons may account for this observation. First, up-regulation of PC degradation-related genes in ACBP6-OE flowers may cause a higher production of PA derived from PC, but the resultant PA could be metabolized to other lipid compounds which can be recycled to PC. This explanation is supported by the observation that PA content was lower in ACBP6-OE flowers than the WT after freezing treatment (Table 1). Secondly, LPCAT mediates the interchange between PC and LysoPC (Wang et al. 2012), and the up-regulation of LPCAT1 in ACBP6-OE flowers after cold acclimation and recovery (Fig. 4) may have increased PC by remolding the intracellular acyl-CoA and PC pools or, more precisely, by reacylation of LysoPC to regenerate PC (Wang et al. 2012) in ACBP6-OE flowers after freezing treatment. This is supported by the observation that the level of LysoPC in ACBP6-OE flowers was lower than the WT after freezing treatment (Table 1). Thirdly, as ACBP6 binds PC but not PA or LysoPC in vitro (Chen et al. 2008), ACBP6 overexpression may allow greater PC binding and accumulation in ACBP6-OE flowers after freezing treatment.
Role of MGDG and MGDG-related enzymes in ACBP6-mediated freezing tolerance in flowers
MGDG is the most abundant galactolipid which is exclusively localized at plastids in plants (Douce and Joyard 1980, Härtel et al. 2000, Nakamura 2013). MGDG is synthesized by MGDG synthases (Nakamura et al. 2010). Arabidopsis has three members in the MGDG synthase family (Awai et al. 2001). Type A MGDG synthase (MGD1), localized at the inner envelope of the chloroplast and up-regulated by light and cytokinins, is needed for photosynthetic growth (Jarvis et al. 2000, Kobayashi et al. 2007). Type B MGDG synthases (MGD2 and MGD3) reside at the outer envelope of chloroplast, are suppressed by cytokinins and are primarily expressed in non-photosynthetic organs (flowers for MGD2 and roots for MGD3) (Awai et al. 2001, Kobayashi et al. 2009). While previous studies have demonstrated an essential role for galactolipids in photosynthesis (Jarvis et al. 2000, Kobayashi et al. 2007), recent studies showed that galactolipids are abundant in flowers, and type B MGDs participate more actively than type A in floral MGDG synthesis (Awai et al. 2001, Kobayashi et al. 2009, Nakamura, 2013). Our results herein revealed a function for MGDs in flowers upon freezing treatment. Floral MGDG content did not significantly differ between the WT and ACBP6-OEs before freezing, but decreased in both the WT and ACBP6-OEs after freezing treatment (Table 1). However, the MGDG content in OE-3 and OE-5 flowers was significantly higher than the WT after freezing treatment (Table 1), suggesting a positive role for MGDG in enhancing floral freezing tolerance. Consistently, elevation in OE-3 and OE-5 flowers compared with the WT of MGD1 after cold acclimation, freezing and recovery, of MGD2 after freezing, and of MGD3 after cold acclimation and freezing suggested that both type A and type B are important in ACBP6-mediated freezing tolerance in flowers (Fig. 6).
Recently, SFR2, a GGGT that shuttles galactose groups from MGDG, was reported to confer freezing tolerance in Arabidopsis and indicated that GGGT remodels galactoglycerolipid biosynthesis at the outer chloroplast membrane and stabilizes membranes during freezing (Moellering et al. 2010). Interestingly, the expression of SFR2 in WT flowers increased after cold acclimation, freezing and recovery and its expression in OE-3 and OE-5 flowers was higher than the WT after cold acclimation and recovery (Fig. 6), suggesting that remodeling of galactoglycerolipid at the outer chloroplast membrane can occur in ACBP6-OE flowers upon freezing treatment and SFR2 may contribute in enhancing freezing tolerance in ACBP6-OE flowers. However, it should be noted that MGD2, MGD3 and SFR2 expression declined in ACBP6-OE rosettes after cold acclimation and/or freezing (Supplementary Fig. S3), implying that the roles of MGD2, MGD3 and SFR2 can vary in flowers and rosettes under freezing stress.
Function of ACBP6 as a transporter for lipids in flowers
De novo fatty acid biosynthesis predominantly occurs in the chloroplasts of higher plants (Ohlrogge and Browse 1995). Subsequently, most plastid-synthesized fatty acids are exported as oleoyl-CoA (18:1-CoA) and palmitoyl-CoA (16:0-CoA) to the endoplasmic reticulum (ER) for biosynthesis of non-plastidial membrane lipids and triacylglycerols (Moreau et al. 1998, Ohlrogge and Browse 1995). Extensive exchange of acyl-CoAs and their derivatives occurs between the plastids and the ER through the cytosol (Ohlrogge and Browse 1995). As AtACBP6 has been shown to bind oleoyl-CoA (Engeseth et al. 1996) and is localized at the cytosol (Chen et al. 2008), it may be a candidate for the transfer of acyl-CoAs from the plastids to the ER. Interestingly, significant changes in plastid-derived MGDG and the regulation of MGDG-related genes (Table 1) were observed between the WT and ACBP6-OE flowers after freezing (Fig. 6). ACBP6 may possibly transfer acyl-CoAs and their derivatives between the plastids and the ER in flowers exposed to freezing stress. Interestingly, the cytosolic 10-kDa Brassica ACBP affected the balance between acyl-CoA and phospholipid pools in fatty acids and triacylglycerol, and BnACBP overexpression resulted in the accumulation of fatty acids for oil biosynthesis in transgenic Arabidopsis seeds (Yurchenko et al. 2009), suggesting its role in enhancing acyl-CoA transfer (Yurchenko and Weselake 2011). In conclusion, our work using electrospray ionization tandem mass spectrometry (ESI MS/MS) and qRT-PCR analyses demonstrated the differences in ACBP6-mediated freezing tolerance in flowers and rosettes, and the potential of ACBP6 in floral protection from freezing stress in floriculture.
Materials and Methods
Plant materials and growth conditions
Transgenic ACBP6-OE homozygous lines (OE-3 and OE-5) transformed with the 35S::ACBP6 construct were generated by Agrobacterium-mediated transformation of Arabidopsis in a previous study (Chen et al. 2008). T3 Arabidopsis seeds were surface-sterilized and germinated on MS medium (Murashige and Skoog 1962) supplemented with 2% sucrose. The plates were incubated at 4°C for 2 d and then transferred to a growth chamber under 16 h light (23°C)/8 h dark (21°C) cycles. Ten-day-old seedlings were potted in soil for further growth under the same light/dark regime.
Freezing treatment
Freezing treatment was performed following Chen et al. (2008) and is summarized in Fig. 1. NA WT and ACBP6-OEs (OE-3 and OE-5) were grown in a growth chamber under 16 h light (23°C)/8 h dark (21°C) cycles before treatment. Detached flowers from 5-week-old plants were subjected to 4°C (cold room) for 3 d to obtain CA flowers. For freezing treatment, CA flowers were transferred to a growth chamber (Watlow series 942) and the temperature was reduced from 4°C to −7°C at 2°C h−1. After 1 h at −7°C, the flowers were thawed overnight (12 h) at 4°C. F flowers were then subjected to a 7 d recovery at 4°C under white light before photography. NA, CA, F and R flowers were collected in liquid nitrogen and stored at −80°C for lipid profiling, qRT-PCR, measurement of sugar and proline contents and Northern blot analysis.
Lipid profiling
Lipid extraction was conducted according to the protocol provided by the Kansas Lipidomics Research Center (www.K-state.edu/lipid/lipidomics). Detached Arabidopsis flowers were placed on water-moistened Whatman No. 1 filter paper in Petri plates. After cold acclimation for 3 d at 4°C, detached flowers in Petri plates were frozen at −7°C for 1 h, and then collected. NA flowers were also harvested. All the harvested samples were transferred to 3 ml of isopropanol 0.01% butylated hydroxytoluene at 75°C for 15 min, and subsequently 1.5 ml of chloroform and 0.6 ml of water were added. Tubes were shaken for 1 h and the extract was transferred to a new glass tube for lipid analysis. The remaining tissue was re-extracted 4–5 times using chloroform : methanol (2 : 1) 0.01% butylated hydroxytoluene with 30 min agitation at each extraction until all the samples became white. The remaining flower tissue was dried overnight at 105°C and weighed to obtain the dry weight. The combined extracts were washed using 1 ml of 1 M KCl followed by 2 ml of water. Finally, the solvent was evaporated under nitrogen. Samples were then sent to the Kansas Lipidomics Research Center for lipid profiling by ESI MS/MS (Devaiah et al. 2006).
qRT-PCR
Total RNA (5 µg) from NA, CA, F and R flowers and rosettes harvested from 5-week-old plants was extracted using the RNeasy Plant Mini Kit (Qiagen) and was reverse-transcribed into first-strand cDNA using the SuperScript First-Strand Synthesis System (Invitrogen), followed by qRT-PCR with a StepOne Plus Real-Time PCR System (Applied Biosystems) and FastStart Universal SYBR Green Master (Roche). The conditions for qRT-PCR were as follows: denaturation at 95°C for 10 min, followed by 40 cycles of 95°C for 15 s and 60°C for 1 min. Three experimental replicates for each reaction were carried out using gene-specific primers, and Arabidopsis ACTIN2 as an internal control. The relative changes in gene expression were analyzed (Schmittgen and Livak 2008) using data from three independent experiments. Primers for qRT-PCR are listed in Supplementary Table S4.
Measurement of sugar and proline contents
Soluble sugar content was measured according to Li et al. (2004). NA or CA rosettes and flowers from 5-week-old plants were collected, weighed and ground into powder, then 1 ml of 75% ethanol was added before overnight incubation at 4°C with shaking. Subsequently, the mixtures were centrifuged at 20,000 × g and the soluble sugars were harvested. Sugar content was measured by incubating a 20 µl aliquot in 1 ml of anthrone reagent [0.15% anthrone (w/v), 72% H2SO4 (v/v) and 28% H2O (v/v)] at 100°C for 1 h. Absorbance was measured at 625 nm and the sugar value expressed as glucose equivalents. For proline measurements (Li et al. 2004), a 100 µl aliquot was incubated with 900 µl of ninhydrin reagent [1% ninhydrin (w/v), 60% glacial acetic acid (v/v) and 40% H2O] at 100°C for 1 h. Subsequently, 3 ml of toluene was added, vortexed and incubated at 23°C for 24 h. Absorbance was read at 520 nm.
Northern blot analysis
Total RNA from 5-week-old NA and CA rosettes was extracted by TRIzol reagent (Invitrogen) according to the manufacturer’s instruction. A 30 µg aliquot of RNA per well was separated on a 1.5% agarose gel containing 6% formaldehyde and transferred to Hybond N membrane (Amersham) for Northern blot analysis (Xiao et al. 2008). Probes were generated using the PCR Digoxigenin Probe Synthesis Kit (Roche), and Northern blot analysis was carried out using the Digoxigenin Nucleic Acid Detection Kit (Roche). The gene-specific primers used are listed in Supplementary Table S4.
Accession numbers
Sequence data from this article can be found in the EMBL/GenBank data libraries under the numbers listed in Supplementary Table S4.
Funding
This work was supported by the Wilson and Amelia Wong Endowment Fund and the University of Hong Kong [CRCG 104001061]; the University of Hong Kong [a University Postgraduate Fellowship to P.L. and a Postgraduate Studentship to Q.F.C.].
Acknowledgments
We thank Z.Y. Du and S. Xiao for helpful suggestions, L. Chi (Free University of Berlin) for technical assistance in photography, and R. Welti and M. Roth (Kansas Lipidomics Research Center) for lipid profiling.
Disclosures
The authors have no conflicts of interest to declare.
Abbreviations
- ABI5
ABA-INSENSITIVE5
- ACBP
acyl-CoA-binding protein
- AtPOX
Arabidopsis thaliana proline oxidase
- CA
cold-acclimated
- CBF
C-repeat binding factor
- CCT
phosphorylcholine cytidylyltransferase
- CK
choline kinase
- COR
COLD-RESPONSIVE
- CRT
C-repeat element
- DAG
diacylglycerol
- DGDG
digalactosyldiacylglycerol
- DRE
dehydration-responsive
- ER
endoplasmic reticulum
- F
freeze-treated
- GGGT
galactolipid galactosyltransferase
- ICE1
INDUCER OF CBF EXPRESSION1
- LPCAT
lysophosphatidylcholine acyl-transferase
- LysoPC
lysophosphatidylcholine
- MGDG
monogalactosyldiacylglycerol
- NA
non-acclimated
- NCED3
9-CIS-EPOXYCAROTENOID DIOXYGENASE3
- OE
overexpressor
- PA
phosphatidic acid
- PC
phosphatidylcholine
- P5CS
Δ1-pyrroline-5-carboxylate synthase
- PE
phosphatidylethanolamine
- PEAMT
phosphoethanolamine N-methyltransferase
- PG
phosphatidylglycerol
- PI
phosphatidylinositol
- PLA
phospholipase A
- PLD
phospholipase D
- PS
phosphatidylserine
- qRT-PCR
quantitative real-time PCR
- R
recovery
- SFR2
SENSITIVE TO FREEZING2
- WT
wild type









