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Volume 6, Issue 1, January 2020
The characterization of two novel neotropical primate papillomaviruses supports the ancient within-species diversity model
Virus Evolution, Volume 6, Issue 1, January 2020, veaa036, https://doi.org/10.1093/ve/veaa036
Co-circulation of both low and highly pathogenic avian influenza H5 viruses in current poultry epidemics in Taiwan
Virus Evolution, Volume 6, Issue 1, January 2020, veaa037, https://doi.org/10.1093/ve/veaa037
Research Article
Avian and serpentine endogenous foamy viruses, and new insights into the macroevolutionary history of foamy viruses
Virus Evolution, Volume 6, Issue 1, January 2020, vez057, https://doi.org/10.1093/ve/vez057
Frequent cross-species transmissions of foamy virus between domestic and wild felids
Virus Evolution, Volume 6, Issue 1, January 2020, vez058, https://doi.org/10.1093/ve/vez058
Intragenic recombination influences rotavirus diversity and evolution
Virus Evolution, Volume 6, Issue 1, January 2020, vez059, https://doi.org/10.1093/ve/vez059
A new lineage of segmented RNA viruses infecting animals
Virus Evolution, Volume 6, Issue 1, January 2020, vez061, https://doi.org/10.1093/ve/vez061
Wide spectrum and high frequency of genomic structural variation, including transposable elements, in large double-stranded DNA viruses
Virus Evolution, Volume 6, Issue 1, January 2020, vez060, https://doi.org/10.1093/ve/vez060
The evolution of protein domain repertoires: Shedding light on the origins of the Herpesviridae family
Virus Evolution, Volume 6, Issue 1, January 2020, veaa001, https://doi.org/10.1093/ve/veaa001
Coevolution analysis of amino-acids reveals diversified drug-resistance solutions in viral sequences: a case study of hepatitis B virus
Virus Evolution, Volume 6, Issue 1, January 2020, veaa006, https://doi.org/10.1093/ve/veaa006
A case for a negative-strand coding sequence in a group of positive-sense RNA viruses
Virus Evolution, Volume 6, Issue 1, January 2020, veaa007, https://doi.org/10.1093/ve/veaa007
Pervasive and non-random recombination in near full-length HIV genomes from Uganda
Virus Evolution, Volume 6, Issue 1, January 2020, veaa004, https://doi.org/10.1093/ve/veaa004
Properties and abundance of overlapping genes in viruses
Virus Evolution, Volume 6, Issue 1, January 2020, veaa009, https://doi.org/10.1093/ve/veaa009
Linking influenza virus evolution within and between human hosts
Virus Evolution, Volume 6, Issue 1, January 2020, veaa010, https://doi.org/10.1093/ve/veaa010
Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses
Virus Evolution, Volume 6, Issue 1, January 2020, veaa012, https://doi.org/10.1093/ve/veaa012
Mutations in the coat protein of a begomovirus result in altered transmission by different species of whitefly vectors
Virus Evolution, Volume 6, Issue 1, January 2020, veaa014, https://doi.org/10.1093/ve/veaa014
Public health in genetic spaces: a statistical framework to optimize cluster-based outbreak detection
Virus Evolution, Volume 6, Issue 1, January 2020, veaa011, https://doi.org/10.1093/ve/veaa011
Detection of H3N8 influenza A virus with multiple mammalian-adaptive mutations in a rescued Grey seal (Halichoerus grypus) pup
Virus Evolution, Volume 6, Issue 1, January 2020, veaa016, https://doi.org/10.1093/ve/veaa016
The temporal RNA virome patterns of a lesser dawn bat (Eonycteris spelaea) colony revealed by deep sequencing
Virus Evolution, Volume 6, Issue 1, January 2020, veaa017, https://doi.org/10.1093/ve/veaa017
Trade-offs between host tolerances to different pathogens in plant–virus interactions
Virus Evolution, Volume 6, Issue 1, January 2020, veaa019, https://doi.org/10.1093/ve/veaa019
In vitro evolution of herpes simplex virus 1 (HSV-1) reveals selection for syncytia and other minor variants in cell culture
Virus Evolution, Volume 6, Issue 1, January 2020, veaa013, https://doi.org/10.1093/ve/veaa013
Newly identified viral genomes in pangolins with fatal disease
Virus Evolution, Volume 6, Issue 1, January 2020, veaa020, https://doi.org/10.1093/ve/veaa020
Phyloanatomic characterization of the distinct T cell and monocyte contributions to the peripheral blood HIV population within the host
Virus Evolution, Volume 6, Issue 1, January 2020, veaa005, https://doi.org/10.1093/ve/veaa005
Novel genome sequences of cell-fusing agent virus allow comparison of virus phylogeny with the genetic structure of Aedes aegypti populations
Virus Evolution, Volume 6, Issue 1, January 2020, veaa018, https://doi.org/10.1093/ve/veaa018
Modeling multipartite virus evolution: the genome formula facilitates rapid adaptation to heterogeneous environments†
Virus Evolution, Volume 6, Issue 1, January 2020, veaa022, https://doi.org/10.1093/ve/veaa022
Opportunistic sampling of wild native and invasive birds reveals a rich diversity of adenoviruses in Australia
Virus Evolution, Volume 6, Issue 1, January 2020, veaa024, https://doi.org/10.1093/ve/veaa024
The dynamics of molecular evolution of emerging avian reoviruses through accumulation of point mutations and genetic re-assortment
Virus Evolution, Volume 6, Issue 1, January 2020, veaa025, https://doi.org/10.1093/ve/veaa025
Intrinsically disordered regions are abundant in simplexvirus proteomes and display signatures of positive selection
Virus Evolution, Volume 6, Issue 1, January 2020, veaa028, https://doi.org/10.1093/ve/veaa028
Tracking echovirus eleven outbreaks in Guangdong, China: a metatranscriptomic, phylogenetic, and epidemiological study
Virus Evolution, Volume 6, Issue 1, January 2020, veaa029, https://doi.org/10.1093/ve/veaa029
Transmission and evolutionary dynamics of human coronavirus OC43 strains in coastal Kenya investigated by partial spike sequence analysis, 2015–16
Virus Evolution, Volume 6, Issue 1, January 2020, veaa031, https://doi.org/10.1093/ve/veaa031
Evolutionary analysis of exogenous and integrated HHV-6A/HHV-6B populations
Virus Evolution, Volume 6, Issue 1, January 2020, veaa035, https://doi.org/10.1093/ve/veaa035
UPΦ phages, a new group of filamentous phages found in several members of Enterobacteriales
Virus Evolution, Volume 6, Issue 1, January 2020, veaa030, https://doi.org/10.1093/ve/veaa030
Papillomaviruses infecting cetaceans exhibit signs of genome adaptation following a recombination event
Virus Evolution, Volume 6, Issue 1, January 2020, veaa038, https://doi.org/10.1093/ve/veaa038
Review Article
Unraveling virus relationships by structure-based phylogenetic classification
Virus Evolution, Volume 6, Issue 1, January 2020, veaa003, https://doi.org/10.1093/ve/veaa003
Rapid Communication
Molecular fossils reveal ancient associations of dsDNA viruses with several phyla of fungi
Virus Evolution, Volume 6, Issue 1, January 2020, veaa008, https://doi.org/10.1093/ve/veaa008
An emergent clade of SARS-CoV-2 linked to returned travellers from Iran
Virus Evolution, Volume 6, Issue 1, January 2020, veaa027, https://doi.org/10.1093/ve/veaa027
New hemagglutinin dual-receptor-binding pattern of a human-infecting influenza A (H7N9) virus isolated after fifth epidemic wave
Virus Evolution, Volume 6, Issue 1, January 2020, veaa021, https://doi.org/10.1093/ve/veaa021
Structure of a filamentous virus uncovers familial ties within the archaeal virosphere
Virus Evolution, Volume 6, Issue 1, January 2020, veaa023, https://doi.org/10.1093/ve/veaa023
Multivariate analyses of codon usage of SARS-CoV-2 and other betacoronaviruses
Virus Evolution, Volume 6, Issue 1, January 2020, veaa032, https://doi.org/10.1093/ve/veaa032
Origin and evolution of dengue virus type 2 causing outbreaks in Kenya: Evidence of circulation of two cosmopolitan genotype lineages
Virus Evolution, Volume 6, Issue 1, January 2020, veaa026, https://doi.org/10.1093/ve/veaa026
Reflections
No evidence for distinct types in the evolution of SARS-CoV-2
Virus Evolution, Volume 6, Issue 1, January 2020, veaa034, https://doi.org/10.1093/ve/veaa034
Erratum
On the stability of sequences inserted into viral genomes
Virus Evolution, Volume 6, Issue 1, January 2020, veaa002, https://doi.org/10.1093/ve/veaa002
Corrigendum
Avian and serpentine endogenous foamy viruses, and new insights into the macroevolutionary history of foamy viruses
Virus Evolution, Volume 6, Issue 1, January 2020, veaa015, https://doi.org/10.1093/ve/veaa015
