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Rapid response to fast viral evolution using AlphaFold 3-assisted topological deep learning

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JunJie Wee and Guo-Wei Wei
Virus Evolution, veaf026, https://doi.org/10.1093/ve/veaf026
Published: 29 April 2025
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Eco-evolutionary dynamics of temperate phages in periodic environments

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Tapan Goel and others
Virus Evolution, veaf019, https://doi.org/10.1093/ve/veaf019
Published: 29 April 2025
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Exploring genetic signatures of zoonotic influenza A virus at the swine-human interface with phylogenetic and ancestral sequence reconstruction

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K M Anker and others
Virus Evolution, veaf028, https://doi.org/10.1093/ve/veaf028
Published: 26 April 2025
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Similarity-weighted entropy for quantifying genetic diversity in viral quasispecies

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Jian Wu
Virus Evolution, veaf029, https://doi.org/10.1093/ve/veaf029
Published: 26 April 2025
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Evolution and adaptation of dengue virus in response to high temperature passaging in mosquito cells

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Fhallon Ware-Gilmore and others
Virus Evolution, veaf016, https://doi.org/10.1093/ve/veaf016
Published: 24 April 2025
Journal Article
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Spatiotemporal dispersion of DENV-1 genotype V in western Colombia

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Diana Rojas-Gallardo and others
Virus Evolution, veaf018, https://doi.org/10.1093/ve/veaf018
Published: 16 April 2025
Journal Article

Evolution of Zika virus in Rag1-deficient mice selects for unique envelope glycosylation motif mutants that show enhanced replication fitness

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Eri Nakayama and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf021, https://doi.org/10.1093/ve/veaf021
Published: 11 April 2025
Journal Article

Discovery of additional genomic segments reveals the fluidity of jingmenvirus genomic organization

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Coralie Valle and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf023, https://doi.org/10.1093/ve/veaf023
Published: 07 April 2025
Journal Article
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Ancient origins and global spread of domestic cat hepatitis B virus

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Edmilson F de Oliveira-Filho and others
Virus Evolution, veaf025, https://doi.org/10.1093/ve/veaf025
Published: 05 April 2025
Journal Article
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Cameroonian blackflies (Diptera: Simuliidae) harbour a plethora of (RNA) viruses

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Lander De Coninck and others
Virus Evolution, veaf024, https://doi.org/10.1093/ve/veaf024
Published: 05 April 2025
Journal Article
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The virome of the panglobal, wide host-range plant pathogen Phytophthora cinnamomi: Phylogeography and evolutionary insights

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Leticia Botella and others
Virus Evolution, veaf020, https://doi.org/10.1093/ve/veaf020
Published: 01 April 2025
Journal Article

Genomic variants and molecular epidemiological characteristics of dengue virus in China revealed by genome-wide analysis

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Bangyao Sun and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf013, https://doi.org/10.1093/ve/veaf013
Published: 17 March 2025
Journal Article

Genome data artifacts and functional studies of deletion repair in the BA.1 SARS-CoV-2 spike protein

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Miguel Álvarez-Herrera and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf015, https://doi.org/10.1093/ve/veaf015
Published: 11 March 2025
Journal Article

Evolutionary dynamics and molecular epidemiology of H1N1 pandemic 2009 influenza A viruses across swine farms in Denmark

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Sophie George and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf014, https://doi.org/10.1093/ve/veaf014
Published: 07 March 2025
Journal Article

Sequence analysis of the hepatitis D virus across genotypes reveals highly conserved regions amidst evidence of recombination

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Shruti Chowdhury and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf012, https://doi.org/10.1093/ve/veaf012
Published: 27 February 2025
Journal Article

Multiple, diverse endogenous giant virus elements within the genome of a brown alga

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Dean Mckeown and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf009, https://doi.org/10.1093/ve/veaf009
Published: 27 February 2025
Journal Article

Recently reported SARS-CoV-2 genomes suggested to be intermediate between the two early main lineages are instead likely derived

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Jonathan E Pekar and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf008, https://doi.org/10.1093/ve/veaf008
Published: 22 February 2025
Journal Article

Improvements in RNA and DNA nanopore sequencing allow for rapid genetic characterization of avian influenza

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Albert Perlas and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf010, https://doi.org/10.1093/ve/veaf010
Published: 18 February 2025
Journal Article

Genomic surveillance and evolution of Getah virus

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Jiaqi Shen and others
Virus Evolution, Volume 11, Issue 1, 2025, veaf007, https://doi.org/10.1093/ve/veaf007
Published: 04 February 2025
Journal Article

Mamastrovirus species are shaped by recombination and can be reliably distinguished in ORF1b genome region

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Yulia Aleshina and Alexander Lukashev
Virus Evolution, Volume 11, Issue 1, 2025, veaf006, https://doi.org/10.1093/ve/veaf006
Published: 31 January 2025