Differential expression levels (fold change) of genes encoding proteins involved in suberin synthesisSuberin and wax biosynthesis.
| Q. suber accession no.a . | Fold changeb . | Best TAIR BLASTX . | q-value . | Annotation . |
|---|---|---|---|---|
| All_000134 | 1.267 | At1g01600 At1g63710 At2g45970 At4g00360 | 2,90e–5 | Cytochrome P450, family 86 (CYP86A4S) |
| All_002989 All_004601 | NDE | At3g10570 | Cytochrome P450, family 77 (CYP77A6) | |
| All_000353 All_000345 All_000340 All_000356 | NDE 1.283 1.504 NDE | At5g41040 | 0.105 2.74e–7 | Omega-hydroxypalmitate O-feruloyl transferase |
| All_013100 All_013141 | NDE NDE | At1g70680 | Caleosin-related family protein | |
| All_000132 | NDE | POPTR_588365 | Cytochrome P450, family 94 (CYP94A1) | |
| All_000075 | NDE | At5g23190 | Cytochrome P450, family 86 (CYP86B1) | |
| All_000025 All_000415 All_003882 All_005135 | NDE | At4g16760 At2g35690 | Long-chain-fatty-acyl-CoA reductase | |
| -------- | At1g02205 | Aldehyde decarbonylase (CER1) | ||
| All_000205 All_000301 | 2.78 NDE | At3g44540 | 0.179 | Fatty acyl-CoA reductase |
| ----------- | At5g37300 | Diacylglycerol O-acyltransferase | ||
| Biosynthesis of unsaturated fatty acids | ||||
| All_001650 | NDE | At1g01710 At4g00520 | Palmitoyl-CoA hydrolase | |
| Fatty acid elongation | ||||
| All_000492 All_005669 All_003985 | NDE NDE 0.63 | At2g33150 At5g47720 At5g48230 | 0.312 | Acetil-CoA acyltransferase |
| All_006584 All_008459 | NDE 2.5 | At3g15290 | 0.003 | 3-hydroxyacyl-CoA dehydrogenase |
| All_002945 All_004827 All_002608 | NDE NDE 4 | At1g60550 | 0.0001 | Enoyl-CoA hydratase |
| All_003110 | 4.2 | At3g45770 | 0.332 | Trans-2-enoyl-CoA reductase |
| All_000415 All_006890 | NDE NDE | At3g51840 At3g06810 | 2-Enoyl-CoA reductase | |
| All_000165 All_000113 All_000221 | 2.125 1.47 2.62 | At1g01120 At1g04220 | 5.31e–9 7.3e–9 0.0002 | 3-ketocyl-CoA synthase (in endoplasmic reticulum) |
| All_002243 | 1.33 | At1g67730 | 0.019 | Very-long-chain 3-oxoacyl-CoA |
| All_004052 | NDE | At5g10480 | Very-long-chain (BR)-3-hydroxyacyl dehydratase | |
| All_001913 | 4.8 | At3g55360 | 2.87e–13 | Very-long-chain enoyl-CoA reductase |
| Q. suber accession no.a . | Fold changeb . | Best TAIR BLASTX . | q-value . | Annotation . |
|---|---|---|---|---|
| All_000134 | 1.267 | At1g01600 At1g63710 At2g45970 At4g00360 | 2,90e–5 | Cytochrome P450, family 86 (CYP86A4S) |
| All_002989 All_004601 | NDE | At3g10570 | Cytochrome P450, family 77 (CYP77A6) | |
| All_000353 All_000345 All_000340 All_000356 | NDE 1.283 1.504 NDE | At5g41040 | 0.105 2.74e–7 | Omega-hydroxypalmitate O-feruloyl transferase |
| All_013100 All_013141 | NDE NDE | At1g70680 | Caleosin-related family protein | |
| All_000132 | NDE | POPTR_588365 | Cytochrome P450, family 94 (CYP94A1) | |
| All_000075 | NDE | At5g23190 | Cytochrome P450, family 86 (CYP86B1) | |
| All_000025 All_000415 All_003882 All_005135 | NDE | At4g16760 At2g35690 | Long-chain-fatty-acyl-CoA reductase | |
| -------- | At1g02205 | Aldehyde decarbonylase (CER1) | ||
| All_000205 All_000301 | 2.78 NDE | At3g44540 | 0.179 | Fatty acyl-CoA reductase |
| ----------- | At5g37300 | Diacylglycerol O-acyltransferase | ||
| Biosynthesis of unsaturated fatty acids | ||||
| All_001650 | NDE | At1g01710 At4g00520 | Palmitoyl-CoA hydrolase | |
| Fatty acid elongation | ||||
| All_000492 All_005669 All_003985 | NDE NDE 0.63 | At2g33150 At5g47720 At5g48230 | 0.312 | Acetil-CoA acyltransferase |
| All_006584 All_008459 | NDE 2.5 | At3g15290 | 0.003 | 3-hydroxyacyl-CoA dehydrogenase |
| All_002945 All_004827 All_002608 | NDE NDE 4 | At1g60550 | 0.0001 | Enoyl-CoA hydratase |
| All_003110 | 4.2 | At3g45770 | 0.332 | Trans-2-enoyl-CoA reductase |
| All_000415 All_006890 | NDE NDE | At3g51840 At3g06810 | 2-Enoyl-CoA reductase | |
| All_000165 All_000113 All_000221 | 2.125 1.47 2.62 | At1g01120 At1g04220 | 5.31e–9 7.3e–9 0.0002 | 3-ketocyl-CoA synthase (in endoplasmic reticulum) |
| All_002243 | 1.33 | At1g67730 | 0.019 | Very-long-chain 3-oxoacyl-CoA |
| All_004052 | NDE | At5g10480 | Very-long-chain (BR)-3-hydroxyacyl dehydratase | |
| All_001913 | 4.8 | At3g55360 | 2.87e–13 | Very-long-chain enoyl-CoA reductase |
Values below zero mean that the genes are more highly expressed in BQC. NDE, not differentially expressed.
aQ. suber accession number refers to the accession number assigned after pyrosequencing.
b Fold change is expressed as the ratio of gene expression of GQC to BQC.
Differential expression levels (fold change) of genes encoding proteins involved in suberin synthesisSuberin and wax biosynthesis.
| Q. suber accession no.a . | Fold changeb . | Best TAIR BLASTX . | q-value . | Annotation . |
|---|---|---|---|---|
| All_000134 | 1.267 | At1g01600 At1g63710 At2g45970 At4g00360 | 2,90e–5 | Cytochrome P450, family 86 (CYP86A4S) |
| All_002989 All_004601 | NDE | At3g10570 | Cytochrome P450, family 77 (CYP77A6) | |
| All_000353 All_000345 All_000340 All_000356 | NDE 1.283 1.504 NDE | At5g41040 | 0.105 2.74e–7 | Omega-hydroxypalmitate O-feruloyl transferase |
| All_013100 All_013141 | NDE NDE | At1g70680 | Caleosin-related family protein | |
| All_000132 | NDE | POPTR_588365 | Cytochrome P450, family 94 (CYP94A1) | |
| All_000075 | NDE | At5g23190 | Cytochrome P450, family 86 (CYP86B1) | |
| All_000025 All_000415 All_003882 All_005135 | NDE | At4g16760 At2g35690 | Long-chain-fatty-acyl-CoA reductase | |
| -------- | At1g02205 | Aldehyde decarbonylase (CER1) | ||
| All_000205 All_000301 | 2.78 NDE | At3g44540 | 0.179 | Fatty acyl-CoA reductase |
| ----------- | At5g37300 | Diacylglycerol O-acyltransferase | ||
| Biosynthesis of unsaturated fatty acids | ||||
| All_001650 | NDE | At1g01710 At4g00520 | Palmitoyl-CoA hydrolase | |
| Fatty acid elongation | ||||
| All_000492 All_005669 All_003985 | NDE NDE 0.63 | At2g33150 At5g47720 At5g48230 | 0.312 | Acetil-CoA acyltransferase |
| All_006584 All_008459 | NDE 2.5 | At3g15290 | 0.003 | 3-hydroxyacyl-CoA dehydrogenase |
| All_002945 All_004827 All_002608 | NDE NDE 4 | At1g60550 | 0.0001 | Enoyl-CoA hydratase |
| All_003110 | 4.2 | At3g45770 | 0.332 | Trans-2-enoyl-CoA reductase |
| All_000415 All_006890 | NDE NDE | At3g51840 At3g06810 | 2-Enoyl-CoA reductase | |
| All_000165 All_000113 All_000221 | 2.125 1.47 2.62 | At1g01120 At1g04220 | 5.31e–9 7.3e–9 0.0002 | 3-ketocyl-CoA synthase (in endoplasmic reticulum) |
| All_002243 | 1.33 | At1g67730 | 0.019 | Very-long-chain 3-oxoacyl-CoA |
| All_004052 | NDE | At5g10480 | Very-long-chain (BR)-3-hydroxyacyl dehydratase | |
| All_001913 | 4.8 | At3g55360 | 2.87e–13 | Very-long-chain enoyl-CoA reductase |
| Q. suber accession no.a . | Fold changeb . | Best TAIR BLASTX . | q-value . | Annotation . |
|---|---|---|---|---|
| All_000134 | 1.267 | At1g01600 At1g63710 At2g45970 At4g00360 | 2,90e–5 | Cytochrome P450, family 86 (CYP86A4S) |
| All_002989 All_004601 | NDE | At3g10570 | Cytochrome P450, family 77 (CYP77A6) | |
| All_000353 All_000345 All_000340 All_000356 | NDE 1.283 1.504 NDE | At5g41040 | 0.105 2.74e–7 | Omega-hydroxypalmitate O-feruloyl transferase |
| All_013100 All_013141 | NDE NDE | At1g70680 | Caleosin-related family protein | |
| All_000132 | NDE | POPTR_588365 | Cytochrome P450, family 94 (CYP94A1) | |
| All_000075 | NDE | At5g23190 | Cytochrome P450, family 86 (CYP86B1) | |
| All_000025 All_000415 All_003882 All_005135 | NDE | At4g16760 At2g35690 | Long-chain-fatty-acyl-CoA reductase | |
| -------- | At1g02205 | Aldehyde decarbonylase (CER1) | ||
| All_000205 All_000301 | 2.78 NDE | At3g44540 | 0.179 | Fatty acyl-CoA reductase |
| ----------- | At5g37300 | Diacylglycerol O-acyltransferase | ||
| Biosynthesis of unsaturated fatty acids | ||||
| All_001650 | NDE | At1g01710 At4g00520 | Palmitoyl-CoA hydrolase | |
| Fatty acid elongation | ||||
| All_000492 All_005669 All_003985 | NDE NDE 0.63 | At2g33150 At5g47720 At5g48230 | 0.312 | Acetil-CoA acyltransferase |
| All_006584 All_008459 | NDE 2.5 | At3g15290 | 0.003 | 3-hydroxyacyl-CoA dehydrogenase |
| All_002945 All_004827 All_002608 | NDE NDE 4 | At1g60550 | 0.0001 | Enoyl-CoA hydratase |
| All_003110 | 4.2 | At3g45770 | 0.332 | Trans-2-enoyl-CoA reductase |
| All_000415 All_006890 | NDE NDE | At3g51840 At3g06810 | 2-Enoyl-CoA reductase | |
| All_000165 All_000113 All_000221 | 2.125 1.47 2.62 | At1g01120 At1g04220 | 5.31e–9 7.3e–9 0.0002 | 3-ketocyl-CoA synthase (in endoplasmic reticulum) |
| All_002243 | 1.33 | At1g67730 | 0.019 | Very-long-chain 3-oxoacyl-CoA |
| All_004052 | NDE | At5g10480 | Very-long-chain (BR)-3-hydroxyacyl dehydratase | |
| All_001913 | 4.8 | At3g55360 | 2.87e–13 | Very-long-chain enoyl-CoA reductase |
Values below zero mean that the genes are more highly expressed in BQC. NDE, not differentially expressed.
aQ. suber accession number refers to the accession number assigned after pyrosequencing.
b Fold change is expressed as the ratio of gene expression of GQC to BQC.
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